CV887021

Overview
NameCV887021
Unique NameCV887021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: OAT1_STAAM (Ornithine aminotransferase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocD1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11
Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 2 
Query:  605 NRAPV--VLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            N AP+  V++ GKG K++D +G++Y+D  SG +V   GH     +KA+ +QA+ L+ +S + YS    +  +++   +  D+V   N+GTEA EAAI  ARK+
Sbjct:   15 NYAPLKLVISKGKGVKVWDTDGKQYIDCISGFSVANQGHCHPTIVKAMTEQASKLSIISRVLYSDNLGKWEEKICHLAKKDKVLSLNSGTEAVEAAIKIARKW 117
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_LACLA (Acetylornithine aminotransferase OS=Lactococcus lactis subsp. lactis GN=argD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.750e-11
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI 889
            L   Y R P  L  G+   L+D  G +YLD +SGI V  LG+       AV  Q + L+H+SN+Y +  Q ++A++L + + + + FF N+GTEANEAA+
Sbjct:    4 LFENYGRLPFSLIKGEDQYLFDDRGNKYLDFTSGIGVMNLGYSFEKGKVAVKAQLDSLSHLSNLYQNPLQEDVAEKL-SQNHSYKAFFCNSGTEANEAAL 102
The following BLAST results are available for this feature:
BLAST of CV887021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
OAT1_STAAM5.934e-1137.86Ornithine aminotransferase 1 OS=Staphylococcus aur... [more]
ARGD_LACLA7.750e-1140.00Acetylornithine aminotransferase OS=Lactococcus la... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887021 ID=CV887021; Name=CV887021; organism=Citrus sinensis; type=EST; length=926bp
ATCTGAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCAC
TCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGT
TATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGTGAGACTCT
TGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTC
GAAGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAAC
CACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTCTTTG
ACTGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGC
TTCTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTT
ACGGTCGCCGGCGGCCATCCACTCTCACAATCGGGCAATCTCCGCCGCCA
GATCAAATTCAACGGCGTAAAACGGCGACCGATGGTGGCGGCGGCAAGTG
TGAACGTGGAAGTGAACGATGCGGCGCGTGGGAGCGCGGGGGGGTTGGGG
AGGAACAACAAGGAGGTGATGGAGGCGGAGAAGAAGTTACTCGTGGGGAC
GTACAATAGGGCACCAGTTGTGCTGGCGAGTGGTAAAGGATGTAAATTGT
ACGATGCTGAAGGGCGAGAGTATTTGGATTTGAGCTCGGGGATTGCTGTG
AATGCGCTTGGACATGGGGATGCTGATTGGATCAAGGCTGTTGTTGATCA
AGCTAATGTGTTGACTCATGTTAGCAATATGTATTATTCCATTCCTCAGA
TAGAGCTTGCTAAGCGTTTGGTGGCTTGTTCTTTTGCTGATCGTGTGTTT
TTCTCCAATACTGGAACGGAAGCAAATGAGGCTGCTATTTAATTTGCCAG
AAAGTTCCAGAGACACTCAAATCCTG
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