CV887021

Overview
NameCV887021
Unique NameCV887021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOUT (Succinylornithine transaminase OS=Escherichia coli (strain UTI89 / UPEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOSM (Succinylornithine transaminase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOSE (Succinylornithine transaminase OS=Escherichia coli (strain SE11) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOLU (Succinylornithine transaminase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOLI (Succinylornithine transaminase OS=Escherichia coli (strain K12) GN=astC PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOLC (Succinylornithine transaminase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOL6 (Succinylornithine transaminase OS=Escherichia coli O6 GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOL5 (Succinylornithine transaminase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOK1 (Succinylornithine transaminase OS=Escherichia coli O1:K1 / APEC GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOHS (Succinylornithine transaminase OS=Escherichia coli O9:H4 (strain HS) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
The following BLAST results are available for this feature:
BLAST of CV887021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
ASTC_ECOUT7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOSM7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOSE7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOLU7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOLI7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOLC7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOL67.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOL57.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOK17.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOHS7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887021 ID=CV887021; Name=CV887021; organism=Citrus sinensis; type=EST; length=926bp
ATCTGAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCAC
TCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGT
TATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGTGAGACTCT
TGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTC
GAAGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAAC
CACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTCTTTG
ACTGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGC
TTCTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTT
ACGGTCGCCGGCGGCCATCCACTCTCACAATCGGGCAATCTCCGCCGCCA
GATCAAATTCAACGGCGTAAAACGGCGACCGATGGTGGCGGCGGCAAGTG
TGAACGTGGAAGTGAACGATGCGGCGCGTGGGAGCGCGGGGGGGTTGGGG
AGGAACAACAAGGAGGTGATGGAGGCGGAGAAGAAGTTACTCGTGGGGAC
GTACAATAGGGCACCAGTTGTGCTGGCGAGTGGTAAAGGATGTAAATTGT
ACGATGCTGAAGGGCGAGAGTATTTGGATTTGAGCTCGGGGATTGCTGTG
AATGCGCTTGGACATGGGGATGCTGATTGGATCAAGGCTGTTGTTGATCA
AGCTAATGTGTTGACTCATGTTAGCAATATGTATTATTCCATTCCTCAGA
TAGAGCTTGCTAAGCGTTTGGTGGCTTGTTCTTTTGCTGATCGTGTGTTT
TTCTCCAATACTGGAACGGAAGCAAATGAGGCTGCTATTTAATTTGCCAG
AAAGTTCCAGAGACACTCAAATCCTG
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