CV887021

Overview
NameCV887021
Unique NameCV887021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECODH (Succinylornithine transaminase OS=Escherichia coli (strain K12 / DH10B) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECOBW (Succinylornithine transaminase OS=Escherichia coli (strain K12 / BW2952) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECO8A (Succinylornithine transaminase OS=Escherichia coli O8 (strain IAI1) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECO81 (Succinylornithine transaminase OS=Escherichia coli O81 (strain ED1a) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECO7I (Succinylornithine transaminase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECO55 (Succinylornithine transaminase OS=Escherichia coli (strain 55989 / EAEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECO45 (Succinylornithine transaminase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ECO24 (Succinylornithine transaminase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=astC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_THEEB (Acetylornithine aminotransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=argD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 2 
Query:  572 EAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            +A  ++++ TY R P+ L  G+GC+++D +GR YLD  +GIA   LGH     ++ V  Q   L HVSN+YY   Q  LA+ LVA S  DRVFF N+G EANEAAI  ARK+
Sbjct:   12 DAFDQVVMSTYGRFPITLVRGEGCRVWDDQGRSYLDFVAGIATCTLGHAHPALVETVSRQMQTLHHVSNLYYIPQQGALAQWLVAHSCGDRVFFCNSGAEANEAAIKLARKY 123
[Close]
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ASTC_ESCF3 (Succinylornithine transaminase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=astC PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.274e-21
Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            ++  Y  AP +   G+G +L+D +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G EANEAA+  ARKF
Sbjct:   14 MLPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKF 119
The following BLAST results are available for this feature:
BLAST of CV887021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
ASTC_ECODH7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECOBW7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECO8A7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECO817.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECO7I7.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECO557.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECO457.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ASTC_ECO247.471e-2247.17Succinylornithine transaminase OS=Escherichia coli... [more]
ARGD_THEEB7.471e-2248.21Acetylornithine aminotransferase OS=Thermosynechoc... [more]
ASTC_ESCF31.274e-2147.17Succinylornithine transaminase OS=Escherichia ferg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887021 ID=CV887021; Name=CV887021; organism=Citrus sinensis; type=EST; length=926bp
ATCTGAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCAC
TCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGT
TATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGTGAGACTCT
TGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTC
GAAGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAAC
CACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTCTTTG
ACTGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGC
TTCTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTT
ACGGTCGCCGGCGGCCATCCACTCTCACAATCGGGCAATCTCCGCCGCCA
GATCAAATTCAACGGCGTAAAACGGCGACCGATGGTGGCGGCGGCAAGTG
TGAACGTGGAAGTGAACGATGCGGCGCGTGGGAGCGCGGGGGGGTTGGGG
AGGAACAACAAGGAGGTGATGGAGGCGGAGAAGAAGTTACTCGTGGGGAC
GTACAATAGGGCACCAGTTGTGCTGGCGAGTGGTAAAGGATGTAAATTGT
ACGATGCTGAAGGGCGAGAGTATTTGGATTTGAGCTCGGGGATTGCTGTG
AATGCGCTTGGACATGGGGATGCTGATTGGATCAAGGCTGTTGTTGATCA
AGCTAATGTGTTGACTCATGTTAGCAATATGTATTATTCCATTCCTCAGA
TAGAGCTTGCTAAGCGTTTGGTGGCTTGTTCTTTTGCTGATCGTGTGTTT
TTCTCCAATACTGGAACGGAAGCAAATGAGGCTGCTATTTAATTTGCCAG
AAAGTTCCAGAGACACTCAAATCCTG
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