CV887021

Overview
NameCV887021
Unique NameCV887021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_CLOAB (Acetylornithine aminotransferase OS=Clostridium acetobutylicum GN=argD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.193e-19
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 2
Query:  581 KKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            K  L+ TY R  V    G+G KLYD +G EY+D  SG+AVN LGH +   +KA+ +Q++ L HVSN Y++   +EL + L   S  D+VF  N+GTEA EA +  ARK+
Sbjct:    3 KSYLMNTYGRFNVTFDKGEGTKLYDKDGNEYIDFVSGVAVNCLGHCNPSIVKAIEEQSSKLMHVSNYYWNENAMELTEILCKNSEFDKVFMCNSGTEAIEAGLKLARKY 111          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_VIBCH (Acetylornithine aminotransferase OS=Vibrio cholerae GN=argD PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19
Identity = 46/108 (42.59%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  584 KLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            +++V  YN    +   G G +++D +G EY+D + GIAV+ LGH     ++A+  QAN L H+SN+  + P + LAK+L   SFA++VFF+N+G EANEAA+  AR++
Sbjct:   14 EVMVPCYNPMEFIPVKGFGSRIWDQQGHEYIDFAGGIAVSCLGHCHPVMVQALTTQANKLWHLSNVMTNEPALRLAKKLTQVSFAEKVFFANSGAEANEAALKLARRY 121          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_NEUCR (Acetylornithine aminotransferase, mitochondrial OS=Neurospora crassa GN=arg-8 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19
Identity = 55/119 (46.22%), Postives = 73/119 (61.34%), Query Frame = 2
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACS-------FADRVFFSNTGTEANEAAI*FARKFQRHSNP 925
            +V TY+R P V   GKG  L+D E R+YLD +SGIAVN+LGH D ++ K + +QA  L H SN+YY+     L+K LV  +        A  VF  N+G+EANEA I FARK  +  +P
Sbjct:   64 MVTTYSRPPPVFVKGKGSYLWDLEDRKYLDFTSGIAVNSLGHCDEEFSKIIAEQAQELVHASNLYYNPWTGALSKLLVESTKASGGMHDASSVFVCNSGSEANEAGIKFARKVGKVLDP 182          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD1_PSESM (Acetylornithine aminotransferase 1 OS=Pseudomonas syringae pv. tomato GN=argD1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.558e-19
Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  584 KLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARK 904
            +++V  Y  A  +   G G +++D  GRE +D S GIAVN LGH     + A+ +QAN L HVSN++ + P + LAK+LV  +FA+RVFF N+G EANEAA   AR+
Sbjct:   15 QVMVPNYAPAGFIPVRGAGSRVWDQAGRELVDFSGGIAVNVLGHCHPALVGALTEQANNLWHVSNVFTNEPTLRLAKKLVDSTFAERVFFCNSGAEANEAAFKLARR 121          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_PROMM (Acetylornithine aminotransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=argD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.035e-19
Identity = 54/105 (51.43%), Postives = 65/105 (61.90%), Query Frame = 2
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARK 904
            ++GTY R PV L  GKGC ++D  G +YLD  +GIA  ALGH D    +++  Q   L HVSN+Y    Q  LA  LV  S AD VFF N+G EANEAAI  ARK
Sbjct:   25 VMGTYKRFPVTLLRGKGCWVWDDHGHQYLDAVAGIATCALGHSDRALRRSLGQQLKQLQHVSNLYRIPEQEALAHWLVENSCADSVFFCNSGAEANEAAIKLARK 129          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_SCHPO (Probable acetylornithine aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=arg1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 50/121 (41.32%), Postives = 75/121 (61.98%), Query Frame = 2
Query:  566 VMEAEKKLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA--------DRVFFSNTGTEANEAAI*FARK 904
            +++ E   ++  Y R PVV A G+G  L+D EGR+Y+D +SG+AV +LGH   +  +   DQ + L H SN++Y+ P IEL+  ++  S A         ++FF+N GTEANE A+ FARK
Sbjct:   39 IIKKEGANIISVYARYPVVAAKGEGSYLFDKEGRKYIDFTSGVAVTSLGHAHPEVARLAADQCSKLVHSSNLFYNEPAIELS-NVINNSLAKNSGIAGPTKIFFANCGTEANETALKFARK 158          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_PROMA (Acetylornithine aminotransferase OS=Prochlorococcus marinus GN=argD PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            L+ TY R P+ +  G GC L+D  G++YLD  +GIA  +LGH D    K +  Q   + HVSN+Y    Q +LA+ LV  S AD VFF N+G EANEAAI  ARK+
Sbjct:   25 LLDTYKRLPLKIVKGNGCWLWDETGKKYLDAVAGIATCSLGHSDKKLSKVLSQQLRKIQHVSNLYRIPEQEDLAQWLVNQSCADSVFFCNSGAEANEAAIKLARKY 130          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_AQUAE (Acetylornithine aminotransferase OS=Aquifex aeolicus GN=argD PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  590 LVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFAD-RVFFSNTGTEANEAAI*FARKFQR 913
            L+  Y R PV    GKG  LYD EG+EYLD  SGI VN+LGH      +A+ +Q   L HVSN+Y +  Q ELA +LV   + + +VFF+N+GTE+ EAAI  ARK+ R
Sbjct:    4 LMNNYARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWR 112          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARUC_PSEAE (Succinylornithine transaminase/acetylornithine aminotransferase OS=Pseudomonas aeruginosa GN=aruC PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.920e-19
Identity = 45/108 (41.67%), Postives = 71/108 (65.74%), Query Frame = 2
Query:  584 KLLVGTYNRAPVVLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTGTEANEAAI*FARKF 907
            + +V  Y  A  +   G+G +++D  GRE +D + GIAV +LGH     +KA+ +QA  + HVSN++ + P + LA++LV  +FA+RVF +N+G EANEAA   AR++
Sbjct:   15 RYMVPNYAPAAFIPVRGEGSRVWDQSGRELIDFAGGIAVTSLGHAHPALVKALTEQAQRIWHVSNVFTNEPALRLARKLVDATFAERVFLANSGAEANEAAFKLARRY 122          
BLAST of CV887021 vs. ExPASy Swiss-Prot
Match: ARGD_BIFLO (Acetylornithine aminotransferase OS=Bifidobacterium longum GN=argD PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.920e-19
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 2
Query:  545 LGRNNKEVMEAEKKLLVGTYNRAPV--------VLASGKGCKLYDAEGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFA---DRVFFSNTGTEANEAAI*FARKFQR 913
            +   ++E +  E    +G Y++  +        V+  G+G  ++D +G EYLD  +GIAVN+LG+    W+KAV DQA  + H+SN + S PQIELA +LV  + A    +V+F N+G E NEAA+  A+ + R
Sbjct:    1 MATEHEEKLGTEDSKWLGEYSQVHMNVFGTPLRVMDHGQGAHIWDVDGNEYLDFLAGIAVNSLGYAHPKWVKAVADQAAKVAHISNYFASEPQIELASKLVKLAGAPEGSKVYFGNSGAEGNEAALKLAKLYGR 134          
The following BLAST results are available for this feature:
BLAST of CV887021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
ARGD_CLOAB1.193e-1945.87Acetylornithine aminotransferase OS=Clostridium ac... [more]
ARGD_VIBCH1.558e-1942.59Acetylornithine aminotransferase OS=Vibrio cholera... [more]
ARGD_NEUCR1.558e-1946.22Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD1_PSESM1.558e-1946.73Acetylornithine aminotransferase 1 OS=Pseudomonas ... [more]
ARGD_PROMM2.035e-1951.43Acetylornithine aminotransferase OS=Prochlorococcu... [more]
ARGD_SCHPO3.471e-1941.32Probable acetylornithine aminotransferase, mitocho... [more]
ARGD_PROMA3.471e-1948.11Acetylornithine aminotransferase OS=Prochlorococcu... [more]
ARGD_AQUAE3.471e-1949.54Acetylornithine aminotransferase OS=Aquifex aeolic... [more]
ARUC_PSEAE5.920e-1941.67Succinylornithine transaminase/acetylornithine ami... [more]
ARGD_BIFLO5.920e-1938.06Acetylornithine aminotransferase OS=Bifidobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887021 ID=CV887021; Name=CV887021; organism=Citrus sinensis; type=EST; length=926bp
ATCTGAAGACTCACCTTTGACATTCATAAACAATATAATAATATCATCAC
TCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCATTGT
TATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGTGAGACTCT
TGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTTGGTC
GAAGGTCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGGAAAC
CACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTCTTTG
ACTGTTTGTTGTACTCCGTCACCGCGAACTGTCCGATCTCCATCACGTGC
TTCTCCTTGGGGTCCTCTATCGGCTTCCATCCCCCAACCAACGCTCCTTT
ACGGTCGCCGGCGGCCATCCACTCTCACAATCGGGCAATCTCCGCCGCCA
GATCAAATTCAACGGCGTAAAACGGCGACCGATGGTGGCGGCGGCAAGTG
TGAACGTGGAAGTGAACGATGCGGCGCGTGGGAGCGCGGGGGGGTTGGGG
AGGAACAACAAGGAGGTGATGGAGGCGGAGAAGAAGTTACTCGTGGGGAC
GTACAATAGGGCACCAGTTGTGCTGGCGAGTGGTAAAGGATGTAAATTGT
ACGATGCTGAAGGGCGAGAGTATTTGGATTTGAGCTCGGGGATTGCTGTG
AATGCGCTTGGACATGGGGATGCTGATTGGATCAAGGCTGTTGTTGATCA
AGCTAATGTGTTGACTCATGTTAGCAATATGTATTATTCCATTCCTCAGA
TAGAGCTTGCTAAGCGTTTGGTGGCTTGTTCTTTTGCTGATCGTGTGTTT
TTCTCCAATACTGGAACGGAAGCAAATGAGGCTGCTATTTAATTTGCCAG
AAAGTTCCAGAGACACTCAAATCCTG
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