CV887020

Overview
NameCV887020
Unique NameCV887020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_SULSO (Acetylornithine/acetyl-lysine aminotransferase OS=Sulfolobus solfataricus GN=argD PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.997e-47
Identity = 95/247 (38.46%), Postives = 146/247 (59.11%), Query Frame = -2
Query:  173 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTLPVLDS 913
            YR PFE ++  V F+EY N+++ + + +   TAAV VEP+QGEGG+  A KEF++ LR+  +   ALL+ DEVQ G GRTG +WA++H+ I PDI+T  K + GG P+ A  +   ++  I  GDHGST+ G+PL   A  A      +        KKG  F   LK+KL     V+++RGLGL+IGI+  V+ +  +   +D  +L L AG    +R +PP +I++ +++ A +   K +   +S
Sbjct:  140 YREPFEPLIGPVEFLEYNNVDSLKSITED--TAAVIVEPVQGEGGVIPAKKEFVKSLREVTEKVNALLIIDEVQTGFGRTGKIWAYQHFDIKPDILTAGKAIGGGFPVSAVFLPNWISEKIEEGDHGSTYGGNPLAAAAVTAACKVAKSEKIAEQAQKKGELFMRILKEKLEDFKIVREIRGLGLMIGIDLKVNPSIAIKVLQDEKVLSLKAGL-TTIRFLPPYLITQSDMEWASDATRKGISETES 383          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_CAMJE (Acetylornithine aminotransferase OS=Campylobacter jejuni GN=argD PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.914e-47
Identity = 99/247 (40.08%), Postives = 153/247 (61.94%), Query Frame = -2
Query:  188 EHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVAS-AINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFD--VSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 919
            E Y+ PF+ ++ GV F +Y +I +  KL+   KT A+ +E +QGEGGI  A K+F + LR  CD+   LL+ DE+QCG+GR+G  +A+EH  I PDIMT AK L  GL +GA ++ +KVAS ++  GDHGST+ G+PLVC    AV +       L +V+K   Y +++L + +      K  +GLG + G+  D  V    V+  C+++ LL+++ G+ N +R +PPLI+ ++ +D+  E L K L
Sbjct:  146 EKYQKPFKPLISGVKFAKYNDISSVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSVKVAKVIQKCQENALLLISCGE-NDLRFLPPLILQKEHIDEMSEKLRKAL 390          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_METKA (Acetylornithine aminotransferase OS=Methanopyrus kandleri GN=argD PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.676e-47
Identity = 106/247 (42.91%), Postives = 143/247 (57.89%), Query Frame = -2
Query:  188 KEHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEF--DVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 922
            K  +R PFE ++P    V YG++ A  K I    TAAV VEP+QGE G+    + FL+ LR+ CD+ G LL+ DEVQ G+GRTG  +A EH  + PDI+ LAK L GG+P+GA +  E+VA A   GDHGSTF G+PL C A  A +  +       +  +KG      L +       V++VRG GL++G+E   D  A  V     D G LV     G+V+RLVPPL+I E EL++A+  L   L
Sbjct:  144 KPEFREPFEPLVPEFEHVPYGDVNAVEKAIDDD-TAAVIVEPVQGEAGVRIPPEGFLRELRELCDEHGLLLIVDEVQSGMGRTGQFFAFEHEDVLPDIVCLAKGLGGGVPVGATIAREEVAEAFEPGDHGSTFGGNPLACAAVCAAVSTVLEENLPEAAERKGKLAMRILSE---AEDVVEEVRGRGLMMGVEVGDDERAKDVAREMLDRGALV-NVTSGDVIRLVPPLVIGEDELEKALAELADAL 385          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_LISIN (Acetylornithine aminotransferase OS=Listeria innocua GN=argD PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.676e-47
Identity = 106/238 (44.54%), Postives = 144/238 (60.50%), Query Frame = -2
Query:  188 FELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 901
            F  ++PG  +V Y +IE+ +  +    TAAV +E IQGEGG+      +L  ++  C  AGALL+ DEVQ GLGRTG L+  +   + PDI TLAK L  GLPIGA +  E ++SA   G HGSTF G+ L   AA  +L  +    FL  V+ K  YF+  L++   +  +V  +RG G +IGIE   SA PVV   RD GLL+LTAG  N++R++PPL +S  E+DQA+ IL   L
Sbjct:  141 FGRLVPGFTYVPYNDIESFKTELDEN-TAAVMLEVIQGEGGVIPGNAAWLMEVQMLCKKAGALLIIDEVQTGLGRTGTLFGFQQTFLDPDIFTLAKGLGNGLPIGAMVGKEHLSSAFGPGSHGSTFGGNKLALAAAKEILLTMKQTGFLEEVNAKAAYFRNLLEEHFEQLENVVAIRGEGFLIGIELGSSAAPVVTELRDKGLLILTAGP-NILRILPPLTVSYAEIDQAISILKSVL 376          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_YERP3 (Succinylornithine transaminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=astC PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.719e-47
Identity = 104/239 (43.51%), Postives = 145/239 (60.67%), Query Frame = -2
Query:  209 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG----IEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 913
            Y   F  +  G++   + ++ +  +LI   +T AV VEPIQGEGG+  A KEFL  LR  CD   ALL+FDE+Q G+GRTG L+A+ HYG+ PD++T AK L GG PIGA L T K ASA++ G HG+TF G+PL C  A  VL  I+ P  LA V  +  +F + L +  AR+    ++RG GL+IG     ++   +  +V A    GL+ L AG  +VVR  P LIIS +E+ + +
Sbjct:  162 YSQDFAPLPGGIHHGIFNDLASAEQLITD-QTCAVIVEPIQGEGGVLPADKEFLHGLRALCDRHNALLIFDEIQTGVGRTGELYAYMHYGVSPDVLTSAKALGGGFPIGAMLTTTKYASALSVGSHGTTFGGNPLACAVAGTVLSLINQPTLLAGVKARHQWFIDELAEINARHNVFAEIRGRGLLIGCVLNAQYAGKSKEIVQAAAQYGLIALIAGP-DVVRFAPSLIISPKEIKEGL 398          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_STAEQ (Acetylornithine aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=argD PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.139e-46
Identity = 101/238 (42.44%), Postives = 146/238 (61.34%), Query Frame = -2
Query:  188 FELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 901
            F  V+PG  F  + +  + + L     TAAV +E IQGE G+  A   F++ L + C     L++ DEVQ G+GRTG L+AHEHY + PDI+TLAK L  GLPIGA L  + +  A  YG HG+TF G+ L   AA   L  I++   L  V  KG +  E L++ L    +V +VRG+GL++GIE     + VV   +  GL++LTAGK NV+RL+PPL I++++L++ +EIL + +
Sbjct:  140 FGPVVPGFKFAIFNDFNSFKSLTS-NNTAAVIIEIIQGESGVLPADSLFMKQLNEYCKQKDILIIVDEVQTGIGRTGKLYAHEHYQLSPDIITLAKGLGNGLPIGAMLGKKNLGHAFGYGSHGTTFGGNRLSLAAANQTLSIINDADLLNDVQSKGQFLIENLRKSLVNKRNVIEVRGVGLMVGIEVTNDPSQVVREAKRMGLIILTAGK-NVIRLLPPLTITKKQLEKGIEILTEII 375          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_YERPS (Succinylornithine transaminase OS=Yersinia pseudotuberculosis GN=astC PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.487e-46
Identity = 104/239 (43.51%), Postives = 144/239 (60.25%), Query Frame = -2
Query:  209 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG----IEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 913
            Y   F  +  G++   + ++ +   LI   +T AV VEPIQGEGG+  A KEFL  LR  CD   ALL+FDE+Q G+GRTG L+A+ HYG+ PD++T AK L GG PIGA L T K ASA++ G HG+TF G+PL C  A  VL  I+ P  LA V  +  +F + L +  AR+    ++RG GL+IG     ++   +  +V A    GL+ L AG  +VVR  P LIIS +E+ + +
Sbjct:  162 YSQDFAPLPGGIHHGIFNDLASAEHLITD-QTCAVIVEPIQGEGGVLPADKEFLHGLRALCDRHNALLIFDEIQTGVGRTGELYAYMHYGVSPDVLTSAKALGGGFPIGAMLTTTKYASALSVGSHGTTFGGNPLACAVAGTVLSLINQPTLLAGVKARHQWFIDELAEINARHNVFAEIRGRGLLIGCVLNAQYAGKSKEIVQAAAQYGLIALIAGP-DVVRFAPSLIISPKEIKEGL 398          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_YERPG (Succinylornithine transaminase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=astC PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.487e-46
Identity = 104/239 (43.51%), Postives = 144/239 (60.25%), Query Frame = -2
Query:  209 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG----IEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 913
            Y   F  +  G++   + ++ +   LI   +T AV VEPIQGEGG+  A KEFL  LR  CD   ALL+FDE+Q G+GRTG L+A+ HYG+ PD++T AK L GG PIGA L T K ASA++ G HG+TF G+PL C  A  VL  I+ P  LA V  +  +F + L +  AR+    ++RG GL+IG     ++   +  +V A    GL+ L AG  +VVR  P LIIS +E+ + +
Sbjct:  162 YSQDFAPLPGGIHHGIFNDLASAEHLITD-QTCAVIVEPIQGEGGVLPADKEFLHGLRALCDRHNALLIFDEIQTGVGRTGELYAYMHYGVSPDVLTSAKALGGGFPIGAMLTTTKYASALSVGSHGTTFGGNPLACAVAGTVLSLINQPTLLAGVKARHQWFIDELAEINARHNVFAEIRGRGLLIGCVLNAQYAGKSKEIVQAAAQYGLIALIAGP-DVVRFAPSLIISPKEIKEGL 398          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_YERPE (Succinylornithine transaminase OS=Yersinia pestis GN=astC PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.487e-46
Identity = 104/239 (43.51%), Postives = 144/239 (60.25%), Query Frame = -2
Query:  209 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG----IEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 913
            Y   F  +  G++   + ++ +   LI   +T AV VEPIQGEGG+  A KEFL  LR  CD   ALL+FDE+Q G+GRTG L+A+ HYG+ PD++T AK L GG PIGA L T K ASA++ G HG+TF G+PL C  A  VL  I+ P  LA V  +  +F + L +  AR+    ++RG GL+IG     ++   +  +V A    GL+ L AG  +VVR  P LIIS +E+ + +
Sbjct:  162 YSQDFAPLPGGIHHGIFNDLASAEHLITD-QTCAVIVEPIQGEGGVLPADKEFLHGLRALCDRHNALLIFDEIQTGVGRTGELYAYMHYGVSPDVLTSAKALGGGFPIGAMLTTTKYASALSVGSHGTTFGGNPLACAVAGTVLSLINQPTLLAGVKARHQWFIDELAEINARHNVFAEIRGRGLLIGCVLNAQYAGKSKEIVQAAAQYGLIALIAGP-DVVRFAPSLIISPKEIKEGL 398          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_YERPA (Succinylornithine transaminase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=astC PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.487e-46
Identity = 104/239 (43.51%), Postives = 144/239 (60.25%), Query Frame = -2
Query:  209 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG----IEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAV 913
            Y   F  +  G++   + ++ +   LI   +T AV VEPIQGEGG+  A KEFL  LR  CD   ALL+FDE+Q G+GRTG L+A+ HYG+ PD++T AK L GG PIGA L T K ASA++ G HG+TF G+PL C  A  VL  I+ P  LA V  +  +F + L +  AR+    ++RG GL+IG     ++   +  +V A    GL+ L AG  +VVR  P LIIS +E+ + +
Sbjct:  162 YSQDFAPLPGGIHHGIFNDLASAEHLITD-QTCAVIVEPIQGEGGVLPADKEFLHGLRALCDRHNALLIFDEIQTGVGRTGELYAYMHYGVSPDVLTSAKALGGGFPIGAMLTTTKYASALSVGSHGTTFGGNPLACAVAGTVLSLINQPTLLAGVKARHQWFIDELAEINARHNVFAEIRGRGLLIGCVLNAQYAGKSKEIVQAAAQYGLIALIAGP-DVVRFAPSLIISPKEIKEGL 398          
The following BLAST results are available for this feature:
BLAST of CV887020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGD_SULSO2.997e-4738.46Acetylornithine/acetyl-lysine aminotransferase OS=... [more]
ARGD_CAMJE3.914e-4740.08Acetylornithine aminotransferase OS=Campylobacter ... [more]
ARGD_METKA6.676e-4742.91Acetylornithine aminotransferase OS=Methanopyrus k... [more]
ARGD_LISIN6.676e-4744.54Acetylornithine aminotransferase OS=Listeria innoc... [more]
ASTC_YERP38.719e-4743.51Succinylornithine transaminase OS=Yersinia pseudot... [more]
ARGD_STAEQ1.139e-4642.44Acetylornithine aminotransferase OS=Staphylococcus... [more]
ASTC_YERPS1.487e-4643.51Succinylornithine transaminase OS=Yersinia pseudot... [more]
ASTC_YERPG1.487e-4643.51Succinylornithine transaminase OS=Yersinia pestis ... [more]
ASTC_YERPE1.487e-4643.51Succinylornithine transaminase OS=Yersinia pestis ... [more]
ASTC_YERPA1.487e-4643.51Succinylornithine transaminase OS=Yersinia pestis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887020 ID=CV887020; Name=CV887020; organism=Citrus sinensis; type=EST; length=923bp
ATAAGTAACTGGTTTATTATATTACCCAATAAATGATGATAACAACCACA
ACTTAACTTCAGGTGAGGTCACAGCAGTTTTCATCAACCCAGGGTTGCAG
CATAAATTGTTAACTTAAGCTAAATCCTTCAACTGCATCCAAGCTCGAAT
GAGGTTCCTCCTAGTTTGAATTGCTGTCCAGCACCGGCAAGGTTTTACAT
AAAATTTCAACTGCTTGATCAAGCTCCTGCTCTGATATGATCAGTGGTGG
TACTAGCCTCACAACATTCCCTTTACCAGCAGTGAGTACAAGAAGGCCAG
AGTCTCGACATGCATCAACCACAGGCGTGGCAGATACGTCGAACTCAATT
CCAATAATTAGCCCGAGTCCACGGACATCTTTCACATGTGGATTTCTTGC
CAGTTTCTGCTTTAAAGTTTCTTTGAAGTAATGGCCTTTCTTGGAGACAC
TGGCCAAGAAAGCAGGATTGGAGATTTTATCTAGAACAGCAATGGCAGCA
TTGCAGACAAGGGGACTGCCGGCAAAAGTGCTTCCATGGTCACCATAATT
TATGGCAGATGCAACTTTTTCAGTTACTAATGCAGCTCCAATAGGAAGGC
CTCCGGCAAGAGGTTTGGCAAGTGTCATTATATCTGGGAAGATACCATAG
TGCTCATGAGCCCAAAGGTATCCTGTTCGGCCTAGACCACATTGAACCTC
ATCGAAGACAAGGAGAGCCCCAGCATCATCACAAGCATCACGTAAAAATT
GTAAAAATTCTTTAGTTGCACTGTATATGCCTCCTTCACCCTGGATGGGT
TCCACAAAAACTGCTGCAGTTTTACCAGGCTGAATCAATTTTCTGGTGGC
TTCTATATTTCCATACTCCACAAAATTGACTCCAGGCATGACAAGTTCAA
AAGGTGATCTATAGTGCTCTTTG
back to top