CV887020

Overview
NameCV887020
Unique NameCV887020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_SULTO (Acetylornithine/acetyl-lysine aminotransferase OS=Sulfolobus tokodaii GN=argD PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.487e-46
Identity = 93/236 (39.41%), Postives = 143/236 (60.59%), Query Frame = -2
Query:  212 EHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQA 919
            + YR PFE +M  V F+ Y NI+  + + +  +TAAV VEPIQGE G+  A ++F++ LR+     GALLV DEVQ G GRTG +WA++HYGI PD++T  K + GG P+ A  + + +A  +  GDHGST+ G+P+   A  A    +     +   S KG  FK+ L++KL+    V+++RG GL+IGIE        +   +D  +L L AG   V+R + P +I++ ++++A
Sbjct:  137 KRYREPFEPLMSPVQFLTYNNIDELKNIDE--QTAAVIVEPIQGESGVIPANEDFMKALREQTQKVGALLVVDEVQTGFGRTGKVWAYQHYGIIPDLLTAGKAIGGGFPVSALFLPDWIAEKLEEGDHGSTYGGNPMAMAAVTAASKVLKEDNVVEQASIKGEIFKKILREKLSDLKSVREIRGKGLMIGIEIRFPPAIALKVMQDERVLALKAG-STVIRFLAPYMITQSDMEEA 369          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_STAES (Acetylornithine aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=argD PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.487e-46
Identity = 101/238 (42.44%), Postives = 146/238 (61.34%), Query Frame = -2
Query:  188 FELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 901
            F  V+PG  F  + +  + + L     TAAV +E IQGE G+  A   F++ L + C     L++ DEVQ G+GRTG L+AHEHY + PDI+TLAK L  GLPIGA L  + +  A  YG HG+TF G+ L   AA   L  I++   L  V  KG +  E L++ L    +V +VRG+GL++GIE     + VV   +  GL++LTAGK NV+RL+PPL I++++L++ +EIL + +
Sbjct:  140 FGPVVPGFKFAIFNDFNSFKSLTS-NNTAAVIIEIIQGESGVLPADPLFMKQLNEYCKQKDILIIVDEVQTGIGRTGKLYAHEHYQLSPDIITLAKGLGNGLPIGAMLGKKNLGHAFGYGSHGTTFGGNRLSLAAANQTLSIINDADLLNDVQSKGQFLIENLRKSLVNKRNVIEVRGVGLMVGIEVTNDPSQVVREAKRMGLIILTAGK-NVIRLLPPLTITKKQLEKGIEILTEII 375          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_PSEPK (Acetylornithine aminotransferase OS=Pseudomonas putida (strain KT2440) GN=argD PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.942e-46
Identity = 100/240 (41.67%), Postives = 146/240 (60.83%), Query Frame = -2
Query:  206 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGI----EFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVE 913
            Y   F   + G++ V Y ++EA +  I   KT AV +EPIQGE G+  A K +L+  R  CD+  ALL+FDEVQ G+GRTG L+A++HYG+ PDI+T AK L GG PIGA L T ++A  +  G HG+T+ G+PL C  A AVLD ++ P  LA +  K   FK  L+Q   +      VRG+GL++G      +   A  V++A    G++VL AG  +VVR  P L++ + ++D+ ++
Sbjct:  157 YSDGFGPKITGISHVPYNDLEALKAQISD-KTCAVVIEPIQGESGVVPADKAYLEGARKLCDEHNALLIFDEVQTGVGRTGSLYAYQHYGVIPDILTSAKSLGGGFPIGAMLTTTELAKHLAVGTHGTTYGGNPLGCAVACAVLDVVNTPETLAGIKAKHERFKTRLEQIGQQYNLFSQVRGVGLLLGCVLTEAWKGKAKDVLNAAEKEGVMVLQAGP-DVVRFAPSLVVEDADIDEGLD 394          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_CAUCR (Succinylornithine transaminase OS=Caulobacter crescentus GN=astC PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.537e-46
Identity = 106/234 (45.30%), Postives = 143/234 (61.11%), Query Frame = -2
Query:  212 RSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHV-KDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQA 910
            R  F  +    +   + +IE   + I P +TAA+ VEPIQGEGG+  AT  FL  LR  CD    LL+ DEVQ G+GRTG+L+AHE YG+ PDI+ +AK L GG PIGA L TE  AS +  G HGST+ G+PL C  A AVLD +  P FL +V ++       L++ L R+  +    +G GL+ G++   SA  VV   RD G++ + AG  +VVRL+PPL ISE E+ +A
Sbjct:  145 REGFTPLYDAFDTTPFNDIEGAARAITP-QTAAILVEPIQGEGGLTPATPGFLAGLRALCDQHDLLLILDEVQTGIGRTGHLFAHELYGVRPDIIAVAKGLGGGFPIGACLATEDAASGMTPGSHGSTYGGNPLACAVASAVLDAVLAPGFLETVRERAALVDALLERLLRRHSDLFVRAQGHGLMRGLQVRASARDVVAHLRDFGVMTVAAG-ADVVRLLPPLTISELEIAEA 376          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_SALTY (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhimurium GN=argD PE=1 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 2.537e-46
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = -2
Query:  206 VEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIE----FDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVE 871
            V + ++ A  K +    T AV VEPIQGEGG+ +AT EFL+ LRD CD+  ALLVFDEVQCG+GRTG L+A+ HYG+ PDI+T AK L GG P+ A L T+++ASA + G HGST+ G+PL C  A A  D I+ P  L  +  K   F + L+    +     D+RG+GL+IG E    +   A   + A  ++G++VL AG  +V+R  P L++ E ++ + ++
Sbjct:  171 VPFNDLHAV-KAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG-ADVMRFAPSLVVEEADIHEGMQ 394          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_ECO57 (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Escherichia coli O157:H7 GN=argD PE=3 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 2.537e-46
Identity = 100/226 (44.25%), Postives = 142/226 (62.83%), Query Frame = -2
Query:  206 VEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIE----FDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVE 871
            V + ++ A  K +    T AV VEPIQGEGG+ +AT EFLQ LR+ CD   ALLVFDEVQCG+GRTG L+A+ HYG+ PDI+T AK L GG PI A L T ++ASA + G HGST+ G+PL C  A A  D I+ P  L  +  K   F + L++   +     D+RG+GL+IG E    +   A   + A  ++G++VL AG  +V+R  P L++ + ++D+ ++
Sbjct:  171 VPFNDLHAV-KAVMDDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQYKGQARDFLYAGAEAGVMVLNAGP-DVMRFAPSLVVEDADIDEGMQ 394          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_BACST (Acetylornithine aminotransferase OS=Bacillus stearothermophilus GN=argD PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.537e-46
Identity = 101/245 (41.22%), Postives = 151/245 (61.63%), Query Frame = -2
Query:  188 KEHYRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 922
            +E   S F  ++P    +   +++A ++ +   + AAV +E +QGEGG+      FLQ   + C   GALL+ DEVQ G+GRTG  +A++H+ + PDI+T AK L  G+P+GA +    +  +   G HGSTF G+P+   AA A L+ + +PAFL  V +KG YF   L   LA    VKDVRGLGL++GIE      P++    ++GLLVL+AG  NV+RL+ PL++++ E+D+AV+IL   L
Sbjct:  135 QEKVHSGFGPLLPEFIHLPLNDVDALKQAMSE-EVAAVMLEVVQGEGGVRPVDPAFLQTASELCQQHGALLIIDEVQTGIGRTGKPFAYQHFDVEPDIITAAKGLGSGIPVGAMIGKAFLKESFGPGVHGSTFGGNPIAMAAAKATLEVVFDPAFLQDVQEKGRYFLARLHDALASLDIVKDVRGLGLLVGIECQTDVAPLLPLIHENGLLVLSAGP-NVIRLL-PLVVTKAEIDEAVDILTNVL 376          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ASTC_ESCF3 (Succinylornithine transaminase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=astC PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.313e-46
Identity = 103/240 (42.92%), Postives = 141/240 (58.75%), Query Frame = -2
Query:  206 YRSPFELVMPGVNFVEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIG----IEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVE 913
            Y   F  + P +    Y ++ +   LI    T AV VEPIQGEGG+  A+  FLQ LR+ CD   ALL+FDEVQ G+GRTG L+A+ HYG+ PD++T AK L GG P+GA L TE+ AS +  G HG+T+ G+PL    A  VLD I+ P  L  V ++  +F E L     R     +VRGLGL+IG     ++   A  +      +G++VL AG GNVVR  P L +SE+E+   ++
Sbjct:  154 YSQDFAPLPPDIRHAAYNDLNSASALIDDS-TCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECASVMTVGTHGTTYGGNPLASAVAGKVLDLINTPEMLIGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG-GNVVRFAPALNVSEEEVTTGLD 391          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_YEAST (Acetylornithine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ARG8 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.313e-46
Identity = 104/249 (41.77%), Postives = 154/249 (61.85%), Query Frame = -2
Query:  188 YRSPFELVMPGVNFVEYGNIEATR--KLIQPGKT--AAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYG--IFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPH-VKDVRGLGLIIGIEFDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVEILCKTL 913
            YR+PF  ++P V+F+   N E T+    I+  K   A + VEPIQGEGG++    E L  L+  C D   +++ DE+QCGLGR+G LWAH +      PDI T AK L  G PI A +V EKV +A+  GDHG+T+ G+PL C+ +  VLD I++ AFL  VSKK    ++ L++  A+ P+ +K +RG GL++G EF    T V+   R+ GLL++TAGK + VR VP L I ++ +++ ++   K +
Sbjct:  172 YRTPFGDLVPHVSFLNL-NDEMTKLQSYIETKKDEIAGLIVEPIQGEGGVFPVEVEKLTGLKKICQDNDVIVIHDEIQCGLGRSGKLWAHAYLPSEAHPDIFTSAKALGNGFPIAATIVNEKVNNALRVGDHGTTYGGNPLACSVSNYVLDTIADEAFLKQVSKKSDILQKRLREIQAKYPNQIKTIRGKGLMLGAEFVEPPTEVIKKARELGLLIITAGK-STVRFVPALTIEDELIEEGMDAFEKAI 418          
BLAST of CV887020 vs. ExPASy Swiss-Prot
Match: ARGD_SALTI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhi GN=argD PE=3 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 3.313e-46
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = -2
Query:  206 VEYGNIEATRKLIQPGKTAAVFVEPIQGEGGIYSATKEFLQFLRDACDDAGALLVFDEVQCGLGRTGYLWAHEHYGIFPDIMTLAKPLAGGLPIGAALVTEKVASAINYGDHGSTFAGSPLVCNAAIAVLDKISNPAFLASVSKKGHYFKETLKQKLARNPHVKDVRGLGLIIGIE----FDVSATPVVDACRDSGLLVLTAGKGNVVRLVPPLIISEQELDQAVE 871
            V + ++ A  K +    T AV VEPIQGEGG+ +AT EFL+ LRD CD   ALLVFDEVQCG+GRTG L+A+ HYG+ PDI+T AK L GG P+ A L T+++ASA + G HGST+ G+PL C  A A  D I+ P  L  +  K   F + L+    +     D+RG+GL+IG E    +   A   + A  ++G++VL AG  +V+R  P L++ E ++++ ++
Sbjct:  171 VPFNDLHAV-KAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDKHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG-ADVMRFAPSLVVEEADINEGMQ 394          
The following BLAST results are available for this feature:
BLAST of CV887020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGD_SULTO1.487e-4639.41Acetylornithine/acetyl-lysine aminotransferase OS=... [more]
ARGD_STAES1.487e-4642.44Acetylornithine aminotransferase OS=Staphylococcus... [more]
ARGD_PSEPK1.942e-4641.67Acetylornithine aminotransferase OS=Pseudomonas pu... [more]
ASTC_CAUCR2.537e-4645.30Succinylornithine transaminase OS=Caulobacter cres... [more]
ARGD_SALTY2.537e-4643.81Acetylornithine/succinyldiaminopimelate aminotrans... [more]
ARGD_ECO572.537e-4644.25Acetylornithine/succinyldiaminopimelate aminotrans... [more]
ARGD_BACST2.537e-4641.22Acetylornithine aminotransferase OS=Bacillus stear... [more]
ASTC_ESCF33.313e-4642.92Succinylornithine transaminase OS=Escherichia ferg... [more]
ARGD_YEAST3.313e-4641.77Acetylornithine aminotransferase, mitochondrial OS... [more]
ARGD_SALTI3.313e-4643.81Acetylornithine/succinyldiaminopimelate aminotrans... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887020 ID=CV887020; Name=CV887020; organism=Citrus sinensis; type=EST; length=923bp
ATAAGTAACTGGTTTATTATATTACCCAATAAATGATGATAACAACCACA
ACTTAACTTCAGGTGAGGTCACAGCAGTTTTCATCAACCCAGGGTTGCAG
CATAAATTGTTAACTTAAGCTAAATCCTTCAACTGCATCCAAGCTCGAAT
GAGGTTCCTCCTAGTTTGAATTGCTGTCCAGCACCGGCAAGGTTTTACAT
AAAATTTCAACTGCTTGATCAAGCTCCTGCTCTGATATGATCAGTGGTGG
TACTAGCCTCACAACATTCCCTTTACCAGCAGTGAGTACAAGAAGGCCAG
AGTCTCGACATGCATCAACCACAGGCGTGGCAGATACGTCGAACTCAATT
CCAATAATTAGCCCGAGTCCACGGACATCTTTCACATGTGGATTTCTTGC
CAGTTTCTGCTTTAAAGTTTCTTTGAAGTAATGGCCTTTCTTGGAGACAC
TGGCCAAGAAAGCAGGATTGGAGATTTTATCTAGAACAGCAATGGCAGCA
TTGCAGACAAGGGGACTGCCGGCAAAAGTGCTTCCATGGTCACCATAATT
TATGGCAGATGCAACTTTTTCAGTTACTAATGCAGCTCCAATAGGAAGGC
CTCCGGCAAGAGGTTTGGCAAGTGTCATTATATCTGGGAAGATACCATAG
TGCTCATGAGCCCAAAGGTATCCTGTTCGGCCTAGACCACATTGAACCTC
ATCGAAGACAAGGAGAGCCCCAGCATCATCACAAGCATCACGTAAAAATT
GTAAAAATTCTTTAGTTGCACTGTATATGCCTCCTTCACCCTGGATGGGT
TCCACAAAAACTGCTGCAGTTTTACCAGGCTGAATCAATTTTCTGGTGGC
TTCTATATTTCCATACTCCACAAAATTGACTCCAGGCATGACAAGTTCAA
AAGGTGATCTATAGTGCTCTTTG
back to top