EY665652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX57_HUMAN (Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57 PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.169e-34 Identity = 71/135 (52.59%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 101 RDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLY-SQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 502 R + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+ + L+ S L Q+PEI+R+P+E+LCL++K+L+ Sbjct: 876 RRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE 1010 HSP 2 Score: 30.4166 bits (67), Expect = 1.169e-34 Identity = 15/38 (39.47%), Postives = 24/38 (63.16%), Query Frame = 1 Query: 538 INPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCL 651 I PP ++++R + I L+D+G L DE++ LG L L Sbjct: 1025 IEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASL 1062
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX57_MOUSE (Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 2.582e-34 Identity = 71/135 (52.59%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 101 RDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLY-SQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 502 R + VI PLHS + S +Q+ VF +PP G KII+STNIAET+ITIDDVVYVIDSG+MKEK YD + +L+ ++VS+A+A QR GRAGR +G+ + L+ S L Q+PEI+R+P+E+LCL++K+L+ Sbjct: 878 RRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE 1012 HSP 2 Score: 30.0314 bits (66), Expect = 2.582e-34 Identity = 15/38 (39.47%), Postives = 23/38 (60.53%), Query Frame = 1 Query: 538 INPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCL 651 I PP +++R + + L+D+G L DEK+ LG L L Sbjct: 1027 IEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASL 1064
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.229e-31 Identity = 70/152 (46.05%), Postives = 99/152 (65.13%), Query Frame = 2 Query: 47 GXDPLNKRWDLLXXXXFXRDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 502 G + + +D+L D ++ +I LHS++ S Q + F PP G RKI+L+TNIAET ITI DVV+VID+GR KE Y + +S+L +++SKASA QR GRAGR + G +RLY++ R S ++ VPEI R+P+EELCL + D Sbjct: 870 GLADIQQLYDILSSDKRFHDRRRYKLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMKCD 1021
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX29_MOUSE (ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.097e-31 Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 502 ++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y + +S+L ++VSKASA QR GRAGR + G +RLY++ R D+ VPEI R+P+EELCL + D Sbjct: 896 RYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCD 1025
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 7.963e-31 Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPNCNI 517 ++ +I LHS++ + Q F PPPG RKI+L+TNIAET ITI DVV+VID+GR KE Y + +S+L ++VSKASA QR GRAGR + G +R+Y++ R D+ VPEI R+P+EELCL + CN+ Sbjct: 897 RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIM----KCNL 1027
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX34_MOUSE (Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 8.804e-30 Identity = 63/127 (49.61%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVK 493 ++V++PLHS + Q KVF P G RK ILSTNIAET++TID + +V+DSG++KE SYDP + LQ W+S+ASA+QR GRAGR G+ YRLY++ + + VPEI+R+ ++ L LQ+K Sbjct: 409 RWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMK 535
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: YG65_SCHPO (Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe GN=SPBC15C4.05 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.707e-29 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 2 Query: 77 LLXXXXFXRDXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLR-AASLPDFQVPEIKRIPIEELCLQVKL 496 L+ R+ KF I LHS + S QQ+ VF PP GCRKI+LSTNIAET +TI DV VID+G +E Y+ ++S L ++VSKA+AKQR+GRAGR Q GI Y L+S+ + +Q PEI R+ ++E+ L+VK+ Sbjct: 922 LIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKM 1062
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX9_CAEEL (Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans GN=rha-1 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 1.397e-28 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 499 K+ I+PLHS + S +Q+KVF P G RKII+STNIAET+ITIDDVVYVIDS + KE+ Y NN+ + W SK + QR GRAGR +AG + L S++R +L D E+ RIP+ ++ L +KLL Sbjct: 690 KYEILPLHSQLTSQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLL 817 HSP 2 Score: 23.8682 bits (50), Expect = 1.397e-28 Identity = 12/49 (24.49%), Postives = 26/49 (53.06%), Query Frame = 1 Query: 520 KILAEDINPPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKLGCLSGPPI 666 + L + + PP + + + VLQ +G L + ++ +LG+ L + P+ Sbjct: 824 EFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPV 872
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHR1_YEAST (Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae GN=ECM16 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.084e-28 Identity = 61/125 (48.80%), Postives = 87/125 (69.60%), Query Frame = 2 Query: 122 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVK 493 ++PL+S++P+ +Q +VF++PP G R I++TN+AET++TI V YV+DSGR KE+ Y+ N V + + WVSKASA QR+GRAGR G YRLYS + F PEI R+P+E + LQ+K Sbjct: 731 VLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMK 855 HSP 2 Score: 21.557 bits (44), Expect = 3.084e-28 Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 1 Query: 544 PPVSETIRNAIIVLQDIGGLPLDEKVPNLGEKL 642 PP + AI +LQ +G L E + G+K+ Sbjct: 870 PPDRVALSKAIQLLQYLGALDNKEMITEDGKKM 902
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX9_BOVIN (ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.240e-28 Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 499 ++ I+PLHS +P +Q+KVF P G KIILSTNIAET+ITI+DVVYVIDS + K K + +NN++ + W SK + +QR GRAGR + G + L S+ R L PE+ R P+ E+ L +KLL Sbjct: 677 RYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLL 805 The following BLAST results are available for this feature:
BLAST of EY665652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665652 ID=EY665652; Name=EY665652; organism=Citrus sinensis; type=EST; length=867bpback to top |