EY665652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX35_PONAB (Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.374e-23 Identity = 56/126 (44.44%), Postives = 85/126 (67.46%), Query Frame = 2 Query: 122 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 499 ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K ++Y+P + L VS+ASA QRAGR GR ++G YRLY++ LP VPE++R + + LQ+K L Sbjct: 312 VLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKAL 437 HSP 2 Score: 20.7866 bits (42), Expect = 3.374e-23 Identity = 8/25 (32.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 538 INPPVSETIRNAIIVLQDIGGLPLD 612 ++PP ++++ A+ +L +GGL D Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKD 472
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX35_HUMAN (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.376e-23 Identity = 56/126 (44.44%), Postives = 85/126 (67.46%), Query Frame = 2 Query: 122 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQVKLL 499 ++P+++ +PS +Q KVF+R RK+I++TN+AET+ITI +VYVID G +K ++Y+P + L VS+ASA QRAGR GR ++G YRLY++ LP VPE++R + + LQ+K L Sbjct: 312 VLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKAL 437 HSP 2 Score: 20.7866 bits (42), Expect = 3.376e-23 Identity = 8/25 (32.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 538 INPPVSETIRNAIIVLQDIGGLPLD 612 ++PP ++++ A+ +L +GGL D Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKD 472
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: TDRD9_RAT (Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus GN=Tdrd9 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.583e-23 Identity = 61/128 (47.66%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 122 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRL-YSQLRAASLPDFQVPEIKRIPIEELCLQVKLLD 502 + PLHS V +Q VF P PG RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAGR G YRL + +++PD VPE+ R P+ L+VKLLD Sbjct: 261 VYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLD 388
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX33_HUMAN (Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.583e-23 Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 119 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQV 490 +++PL++ +P QQ +VF+ P G RK+I+STNIAET+ITI + YV+D+G +K K Y+P + + L VSK A QR GRAGR +GI YRLY++ VPEI+R + + LQ+ Sbjct: 323 LVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQL 446
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.679e-23 Identity = 54/131 (41.22%), Postives = 88/131 (67.18%), Query Frame = 2 Query: 119 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAAS-LPDFQVPEIKRIPIEELCLQVKLLDPN 508 +I+P++S +PS Q K+F+ PPG RK++++TNIAET++TID + YVID G K+K ++P N + +L + +S+A+A+QR+GRAGR G YRLY++ + + +PEI+R + L +K + N Sbjct: 751 IILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGIN 881
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: TDRD9_MOUSE (Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23 Identity = 61/128 (47.66%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 122 IIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLD 502 + PLHS V +Q VF P PG RKIILSTNIAE+++T+ DV YVID + D N +L+ SW SK S QR GRAGR G YRL + +++PD VPE+ R P+ L+VKLLD Sbjct: 260 VYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLD 387
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX33_MOUSE (Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23 Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 119 VIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQLRAASLPDFQVPEIKRIPIEELCLQV 490 +++PL++ +P QQ +VF+ P G RK+I+STNIAET+ITI + YV+D+G +K K Y+P + + L VSK A QR GRAGR +GI YRLY++ VPEI+R + + LQ+ Sbjct: 314 LVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQL 437
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 104 DXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 508 D + +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K Y+ + L + +S+A AKQRAGRAGR G YRLY++ + VPEI+R + L +K + N Sbjct: 827 DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIN 962
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 104 DXXKFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLYSQ-LRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 508 D + +I+P++S +PS Q ++F PPG RK++++TNIAET++TID + YV+D G +K+K Y+ + L + +S+A AKQRAGRAGR G YRLY++ + VPEI+R + L +K + N Sbjct: 803 DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIN 938
BLAST of EY665652 vs. ExPASy Swiss-Prot
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.033e-22 Identity = 56/134 (41.79%), Postives = 87/134 (64.93%), Query Frame = 2 Query: 113 KFVIIPLHSMVPSVQQKKVFKRPPPGCRKIILSTNIAETAITIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKASAKQRAGRAGRCQAGIWYRLY--SQLRAASLPDFQVPEIKRIPIEELCLQVKLLDPN 508 + VI+P++S +PS Q ++F+ PPG RK++++TNIAET++TID + YV+D G +K+ +DP + +L + +S+A A+QR+GRAGR G YRLY S R LP +PEI+R + L +K + N Sbjct: 752 ELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPS-PIPEIQRQNLSHTILMLKAMGIN 884 The following BLAST results are available for this feature:
BLAST of EY665652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665652 ID=EY665652; Name=EY665652; organism=Citrus sinensis; type=EST; length=867bpback to top |