CV887014

Overview
NameCV887014
Unique NameCV887014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV887014 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.916e-64
Identity = 128/300 (42.67%), Postives = 186/300 (62.00%), Query Frame = 2 
Query:   68 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGKTLQRVYVPEEQVLKNIQEAAPPVNVILSIQHSAFVKGDQTNFQIETSFGVEASQLYPDVKYTTV 961
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L SLWE+KIG+TL R  V  +++L +  E   P +++ S  H  F+ G Q NF I+    VE   LYPD K+ ++
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSL 309
The following BLAST results are available for this feature:
BLAST of CV887014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN4.916e-6442.67Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026F03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV887014 ID=CV887014; Name=CV887014; organism=Citrus sinensis; type=EST; length=961bp
CAAAACAAAACAGAAAAAAAAAGGAAAGAATCCCCGAAATTGAACTGAAT
AATTCTCGGTAATGGCGTCGAAAAGCAAGATTCTATTCATCGGCGGTACA
GGGTACATCGGCAAATTCATCGTCGAAGCGAGCGCGAAAGCCGGCCACCC
GACGTTCGTGCTCGTGAGAGAATCCACACTCTCCGATCCTTCCAAATCTC
AGCTCCTCGATCACTTCAAAAAACTCGGCGTCAATCTCGTCATCGGAGAT
GTGTTGAATCACGAGAGCTTGGTGAAGGCGATAAAACAAGTGGACGTGGT
GATATCAACGGTCGGTCACACTTTATTAGGTGATCAGGTCAAGATTATTG
CGGCCATTAAAGAAGCTGGTAACATTAAGAGATTCTTCCCTTCAGAATTT
GGGAATGATGTTGATCGAGTCCATGCCGTTGAGCCAGCAAAATCAGCATT
TGCCACAAAGGCAAAAATCCGCCGAGCCGTTGAGGCTGAAGGGATTCCGT
ATACTTATGTAGCGTCGAATTTCTTTGCTGCTTACTTCCTTCCCAATTTG
TCGCAGCCCGGGGCCACTGCCCCACCTAGGGATAAAGTTGTCATCTTAGG
CGATGGAAATCCAAAAGCTGTTTATAACAAGGAAGATGATATTGGAACCT
ATACTATCAAAGCGGTTGATGATCCCAGAACCTTGAACAAAATCCTTTAC
ATTAAACCCCCTGGTAATATTTACTCATTCAATGATCTTGTGTCCTTGTG
GGAGAGAAAGATTGGCAAAACCCTCCAAAGGGTGTACGTTCCGGAGGAGC
AAGTCCTAAAGAATATTCAAGAAGCTGCACCTCCAGTCAATGTGATATTA
TCAATTCAGCACTCTGCTTTCGTGAAAGGAGATCAAACCAACTTCCAGAT
TGAAACATCGTTTGGAGTTGAAGCCTCGCAGCTCTATCCTGATGTCAAGT
ACACTACAGTT
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