CV886960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: HSF_SCHPO (Heat shock factor protein OS=Schizosaccharomyces pombe GN=hsf1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18 Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 2 Query: 416 FLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV------------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGE----------ACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQHQQQSRDQL 850 F K Y MV D STD+++ WS +SF+V F+ +LP+YFKH+NFSSF+RQLN YGF KV + EFAN F Q LL + R++ SQ +++ + + Q L EL R++ D L E + R+ Q++ ++ + Sbjct: 53 FSNKLYNMVNDSSTDSLIRWSDRGDSFLVIGHEDFAKLVLPRYFKHNNFSSFVRQLNMYGFHKVPHIQQGVLQSDSPNELLEFANPNFQRDQPELLCLVTRKKAGSQPVEESNTSLDMSTISSELQNIRIQQMNLSNELSRIQVDNAALWQENMENRERQRRHQETI 219
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: HSF2_CHICK (Heat shock factor protein 2 OS=Gallus gallus GN=HSF2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.220e-18 Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 2 Query: 401 AGPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACL----------EVGQYGLDGELERLKRDRNVLMAEIVRLR-QHQQQSR 841 AG P FL+K + +V + ++ +++WS+ SF+V D +F+ +LPKYFKH+N +SF+RQLN YGFRKV EF + F G++ LL+ IKR+ S+ + + + L E+ Q ++ L LKR+ L E+ LR +H +Q + Sbjct: 19 AGVPAFLSKLWALVGEAPSNQLITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHVDSGIVKLERDGLVEFQHPYFKQGREDLLEHIKRKVSSSRPEENKISQEDLSKIISSAQKVEIKQETIESRLSALKRENESLWREVAELRAKHLKQQQ 187
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: HSF2_MOUSE (Heat shock factor protein 2 OS=Mus musculus GN=Hsf2 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18 Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 410 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQR----------GGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLR-QHQQQSR 841 P FL+K + +VE+ T+ ++WS+ SF+V D +F+ +LPKYFKH+N +SF+RQLN YGFRKV EF + F GQ LL+ IKR+ S+ + + +++ Q ++ L LK + L E+ LR +H QQ + Sbjct: 8 PAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIESGIIKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQ 173
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: HSF2_HUMAN (Heat shock factor protein 2 OS=Homo sapiens GN=HSF2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.082e-18 Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 2 Query: 410 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQR----------GGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLR-QHQQQSR 841 P FL+K + +VE+ T+ ++WS+ SF+V D +F+ +LPKYFKH+N +SF+RQLN YGFRKV EF + F GQ LL+ IKR+ S+ + + +++ Q ++ L LK + L E+ LR +H QQ + Sbjct: 8 PAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQ 173
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: HSF_YEAST (Heat shock factor protein OS=Saccharomyces cerevisiae GN=HSF1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 410 PPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV-----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGG 721 P F+ K + M+ D S ++ W+ SFIV + +F +LPKYFKHSNF+SF+RQLN YG+ KV D+W+F NE F+ G++ LL+ I R++ S + G Sbjct: 173 PAFVNKLWSMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQKGSSNNHNSPSG 287
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: HSF_DROME (Heat shock factor protein OS=Drosophila melanogaster GN=Hsf PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 2 Query: 401 AGPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKV----------DPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRG---GEACLEV---------GQYGLDGELERLKRDRNVLMAEIVRLRQ-HQQQSR 841 +G P FL K + +V+D T+ ++ W++ SF++ + QF+ LLP +KH+N +SFIRQLN YGF K+ D D EF++ F LL IKR+ +++ +G EA ++ Q LD +K++ VL EI LRQ H +Q + Sbjct: 44 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRKISNNKNGDDKGVLKPEAMSKILTDVKVMRGRQDNLDSRFSAMKQENEVLWREIASLRQKHAKQQQ 213
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: PRR1_SCHPO (Transcription factor prr1 OS=Schizosaccharomyces pombe GN=prr1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.341e-16 Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 2 Query: 404 GPPPFLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVDPDR----------WEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLK-RDRNV 793 G F+ K + M+E+ I+ WS + +SFIV D+++F+ T+LP++FKHSNF+SF+RQLN Y F KV + WEF ++ F K LL IKR+ +++ +E + +D L+ K DRN+ Sbjct: 6 GSSDFVRKLFNMLEEPEYRHILRWSDSGDSFIVLDTNEFTKTILPRHFKHSNFASFVRQLNKYDFHKVRHEEGAPSIYGEGAWEFRHDDFQLHHKDLLDNIKRKAPSKRNLANENTAPVIENLKQQVDSILDFQKLLDRNL 146
BLAST of CV886960 vs. ExPASy Swiss-Prot
Match: SKN7_YEAST (Transcription factor SKN7 OS=Saccharomyces cerevisiae GN=SKN7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11 Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 416 FLTKTYEMVEDLSTDAIVSWSRTRNSFIVWDSHQFSTTLLPKYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRHVSQSMQQRGGEACLEVGQYGLDGELERLKRDRNVLMAEIVRLRQH 826 F+ K + ++E+ IV+W+ SF+V D+ +F+T +LP +FKHSNF+SF+RQLN Y F KV K + +R ++ QS + + E + G+ GLD ++ R VL+ E + H Sbjct: 87 FVRKLFRILENNEYPDIVTWTENGKSFVVLDTGKFTTHILPNHFKHSNFASFVRQLNKYDFHKV----------------KRSPEERQRCKYGEQSWEFQHPEFRVHYGK-GLDNIKRKIPAQRKVLLDESQKALLH 206 The following BLAST results are available for this feature:
BLAST of CV886960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CV886960 ID=CV886960; Name=CV886960; organism=Citrus sinensis; type=EST; length=878bpback to top |