CV886950

Overview
NameCV886950
Unique NameCV886950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV886950 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = -1 
Query:  616 GESSGWTM----GTDYSTWTSGKTFAVGDSIVFNYGSGH-TVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 891
            G+S  W +       ++ W     F VGD IVF Y SG  +V EV+   YNSC   N + + + G T + L  +G  YFI G  GHC  G KL++ V
Sbjct:   35 GKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131
The following BLAST results are available for this feature:
BLAST of CV886950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ENL1_ARATH5.772e-1138.14Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886950 ID=CV886950; Name=CV886950; organism=Citrus sinensis; type=EST; length=903bp
TTTTTTTTTTTTTTTAAAAACAACCGCTTCAAGTTTTAAATTAACAGCAT
CAAACTAACCCAACAAAACTAAAACAAATATTCTCATACTGGGTAATGTT
CCATCAAGTGCAGCAAAGTAAAAAGCATAAAAACAAAAATAAAGGCATTT
AGAAAAGAGATGTTCCCTTTCCCTTCTTGTCTCCACCAATTTCAAAGTGC
TTGCTCATAATATTAAGGATCAAATCCCCTGTGATTGTGAACAGAAAAGC
TATGGCCCTATAATAATAACACACGCATATTTTTTTTTTGTTTTTCAAGG
AAACAACCTACTAATTGATAAAACCAGGCCTCATGAATACAAACTAGAAA
TGCATAACGTAAAGGAGAAAAAGCACTGCCTCTATCCTGGTCATCAGCAA
GGAGAAGCTTATGAGAGAACCAACATGAAGAATGCAACACAAGTAATTCC
TAGAGCAACAAATGGAGAGAAATTAGCCCCCGAAGATAAATCAGGTGTAT
AAGGTGAAGTTTTGGTGGTTGTCGTATTGCGGCCAGAAGGCAGCGAAGAA
CCGCCAGAGCCACCTGTAGATGATGAACCTGAGCCTGATGGAGAAGCGGT
TGGTGACCCTGATCCCACAGTGACGGCAAGCTTCATGCCGCTGCCGCAGT
GACCAGGGACACCACAAATGAAGTAGTGTGTCCCGGCAGTCTTTAGAGTG
ATGGTGGTGGCACCTGAACTGTCTGATGTGATTGCATTTCCCACGGTGCA
TGAGTTGTAGTCACTACCACTCACTTCATCAACAGTGTGCCCACTTCCAT
AGTTGAAAACAATGCTGTCACCAACAGCAAATGTCTTGCCACTGGTCCAA
GTGCTATAGTCAGTACCCATTGTCCAGCCTGAGGACTCTCCTACATTGTA
AAC
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