CV886949

Overview
NameCV886949
Unique NameCV886949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV886949 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.138e-11
Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = 1 
Query:   79 GESSGWTM----GTDYSTWTSGKTFAVGDSIVFNYGSGH-TVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 354
            G+S  W +       ++ W     F VGD IVF Y SG  +V EV+   YNSC   N + + + G T + L  +G  YFI G  GHC  G KL++ V
Sbjct:   35 GKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131
The following BLAST results are available for this feature:
BLAST of CV886949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ENL1_ARATH5.138e-1138.14Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026B08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886949 ID=CV886949; Name=CV886949; organism=Citrus sinensis; type=EST; length=838bp
GTTTTCTCTGGGTTGGTTGTTTGTGCAGTTTTAGTCTTTTGTGTGGTGGT
TCCAAGCTTTGCTACAGTTTACAATGTAGGAGAGTCCTCAGGCTGGACAA
TGGGTACTGACTATAGCACTTGGACCAGTGGCAAGACATTTGCTGTTGGT
GACAGCATTGTTTTCAACTATGGAAGTGGGCACACTGTTGATGAAGTGAG
TGGTAGTGACTACAACTCATGCACCGTGGGAAATGCAATCACATCAGACA
GTTCAGGTGCCACCACCATCACTCTAAAGACTGCCGGGACACACTACTTC
ATTTGTGGTGTCCCTGGTCACTGCGGCAGCGGCATGAAGCTTGCCGTCAC
TGTGGGATCAGGGTCACCAACCGCTTCTCCATCAGGCTCAGGTTCATCAT
CTACAGGTGGCTCTGGCGGTTCTTCGCTGCCTTCTGGCCGCAATACGACA
ACCACCAAAACTTCACCTTATACACCTGATTTATCTTCGGGGGCTAATTT
CTCTCCATTTGTTGCTCTAGGAATTACTTGTGTTGCATTCTTCATGTTGG
TTCTCTCATAAGCTTCTCCTTGCTGATGACCAGGATAGAGGCAGTGCTTT
TTCTCCTTTACGTTATGCATTTCTAGTTTGTATTCATGAGGCCTGGTTTT
ATCAATTAGTAGGTTGTTTCCTTGAAAAACAAAAAAAAAATATGCGTGTG
TTATTATTATAGGGCCATAGCTTTTCTGTTCACAATCACAGGGGATTTGA
TCCTTAATATTATGAGCAAGCACTTTGAAATTGGTGGAGACAAGAAGGGA
AAGGGAACATCTCTTTTCTAAATGCCTTTATTTTTGTT
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