CV886946

Overview
NameCV886946
Unique NameCV886946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.394e-87
Identity = 162/209 (77.51%), Postives = 176/209 (84.21%), Query Frame = -1
Query:  222 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 848
            ENNKGARVLVVCSEITAVTFRGP+++HLDSLVGQALF           DP   VERPL++LVS +QT++PDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+FWIAHPGGPAILDQVE          +ATR+VLS YGNMSSACVLFILDEMRK S +E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIMGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKQEKLRATREVLSNYGNMSSACVLFILDEMRKASTKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 3.394e-87
Identity = 162/209 (77.51%), Postives = 176/209 (84.21%), Query Frame = -1
Query:  222 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 848
            ENNKGARVLVVCSEITAVTFRGP+++HLDSLVGQALF           DP   VERPL++LVS +QT++PDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+FWIAHPGGPAILDQVE          +ATR+VLS YGNMSSACVLFILDEMRK S +E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIIGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKPEKLRATREVLSNYGNMSSACVLFILDEMRKASTKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.433e-87
Identity = 162/209 (77.51%), Postives = 175/209 (83.73%), Query Frame = -1
Query:  222 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 848
            ENNKGARVLVVCSEITAVTFRGP+++HLDSLVGQALF           DP   VERPL++LVS +QT++PDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+FWIAHPGGPAILDQVE          +ATR+VLS YGNMSSACVLFILDEMRK S  E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIMGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKQEKLRATREVLSNYGNMSSACVLFILDEMRKASTNEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.433e-87
Identity = 166/211 (78.67%), Postives = 177/211 (83.89%), Query Frame = -1
Query:  216 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            ENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF           DP   VE+PL+QLV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF PLGISD+NSIFWIAHPGGPAILDQVE+         +ATR VLSEYGNMSSACVLFILD+MRKKS+E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTV 388          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 4.433e-87
Identity = 163/209 (77.99%), Postives = 174/209 (83.25%), Query Frame = -1
Query:  222 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 848
            ENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQ+LF           DP   VE+PL++LVS +QTILP SDGAIDGHLREVGLTFHLLKDVP LIS N+EKSL EAF PLGISDWNS+FWIAHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMRKKS EE   TTGEGL+WGVLFGFGPGLTVETVVLHS+
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQSLFGDGAAAIIIGSDPIPEVEKPLFELVSAAQTILPSSDGAIDGHLREVGLTFHLLKDVPRLISMNVEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEEGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 5.790e-87
Identity = 166/211 (78.67%), Postives = 177/211 (83.89%), Query Frame = -1
Query:  216 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            ENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF           DP   VE+PL+QLV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF PLGISD+NSIFWIAHPGGPAILDQVE+         +ATR VLSEYGNMSSACVLFILD+MRKKS+E    TTGEGLDWGVLFGFGPGLTVETVVL SV +
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYGNMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVETVVLRSVTL 388          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 7.561e-87
Identity = 161/210 (76.67%), Postives = 173/210 (82.38%), Query Frame = -1
Query:  219 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 848
            ENNK ARVLVVCSEIT +TFRGP DTHLDSLVGQALF           DP   +E+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF PLGISDWNSIFWIAHPGGPAILDQVE+         K+TRQVL +YGNMSSACVLFILDEMR  S ++   TTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  179 ENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPDKLKSTRQVLRDYGNMSSACVLFILDEMRNASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.876e-87
Identity = 161/211 (76.30%), Postives = 175/211 (82.94%), Query Frame = -1
Query:  216 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            ENNKGARVLVVCSEITAVTFRGP+++HLDSLVGQALF           DP   +ERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNI K+L EAF PLGISDWNSIFWIAHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMRK S  +  +TTGEGL+WGVLFGFGPGLTVETVVLHSV +
Sbjct:  179 ENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPIPEIERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIGKALDEAFQPLGISDWNSIFWIAHPGGPAILDQVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASARDGLSTTGEGLEWGVLFGFGPGLTVETVVLHSVNV 389          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.876e-87
Identity = 158/211 (74.88%), Postives = 177/211 (83.89%), Query Frame = -1
Query:  216 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            ENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF           DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIAHPGGPAILDQVE           A+R VL+EYGNMSSACVLFILDEMR++S E  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  180 ENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CV886946 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 9.876e-87
Identity = 158/211 (74.88%), Postives = 177/211 (83.89%), Query Frame = -1
Query:  216 ENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 848
            ENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF           DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIAHPGGPAILDQVE           A+R VL+EYGNMSSACVLFILDEMR++S E  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  180 ENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
The following BLAST results are available for this feature:
BLAST of CV886946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_SOLTU3.394e-8777.51Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHS1_SOLLC3.394e-8777.51Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSA_SOLTU4.433e-8777.51Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]
CHS5_SOYBN4.433e-8778.67Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_CAMSI4.433e-8777.99Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS1_SOYBN5.790e-8778.67Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS9_DAUCA7.561e-8776.67Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHSY_CATRO9.876e-8776.30Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS8_BROFI9.876e-8774.88Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI9.876e-8774.88Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_026B06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T7_B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886946 ID=CV886946; Name=CV886946; organism=Citrus sinensis; type=EST; length=848bp
TTTTTTTTTTTTTTTCTCAAATTCCCAAGAATTTATGCATAAACACAAAG
CGTTGCCCAGGTTTGGTGACGTCATAAGAGAAAAGGCACGATGCCTTAAA
CTCAATTGACAAAACTAAACCTTCACACGATCAACCAATAACTCAACTGT
GAAAGCATACAACATAAAGTTACTGAACTACTAAACATACTGATGGAGTT
CTCACTTCAAGCTTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGG
TGAGCCCCGGCCCGAACCCGAACAGCACACCCCAATCAAGCCCTTCGCCG
GTGGTGGCTTTCGCTTCCTCAACAGACTTCTTTCTCATCTCGTCAAGGAT
GAACAAGACACAAGCGCTTGACATGTTACCGTACTCACTCAACACTTGAC
GTGTGGCCTTCAGCTTCTCCCCTTTGAGGCCCAGTTTAGACTCCACTTGG
TCCAGAATTGCGGGCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCA
GTCGCTGATGCCAAGCGGGGCGAACGCTTCAGACAGGCTTTTCTCTATAT
TCTTTGAGATCAAGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCG
ACTTCGCGCAAGTGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGT
CTGCGAAGTCGACACGAGCTGATACAACGGACGCTCGACCGACGTGTCAG
GATCGGCACCCACGATCACAGCAGCAGCACCATCACCGAACAAAGCCTGG
CCCACAAGAGAATCAAGATGAGTATCGGCAGGGCCGCGGAAAGTGACTGC
CGTGATCTCCGAACAGACAACAAGAACGCGAGCGCCCTTGTTGTTCTC
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