CV886907

Overview
NameCV886907
Unique NameCV886907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_ECOLI (5-hydroxyisourate hydrolase OS=Escherichia coli (strain K12) GN=yedX PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            ++ H+L+   G PAA V V LE            + D +GW+   ++ T+KDGR   L    +    G Y++ F TG Y      E FFP + + F I  ++  EH+HVPLLLS + ++TYRGS
Sbjct:   29 LSVHILNQQTGKPAADVTVTLEK-----------KAD-NGWLQLNTAKTDKDGRIKALWPE-QTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHI--NKVNEHYHVPLLLSQYGYSTYRGS 137          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_ECO57 (5-hydroxyisourate hydrolase OS=Escherichia coli O157:H7 GN=yedX PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            ++ H+L+   G PAA V V LE            + D +GW+   ++ T+KDGR   L    +    G Y++ F TG Y      E FFP + + F I  ++  EH+HVPLLLS + ++TYRGS
Sbjct:   29 LSVHILNQQTGKPAADVTVTLEK-----------KAD-NGWLQLNTAKTDKDGRIKALWPE-QTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHI--NKVNEHYHVPLLLSQYGYSTYRGS 137          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_SCHPO (Probable 5-hydroxyisourate hydrolase OS=Schizosaccharomyces pombe GN=SPCC285.04 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.375e-12
Identity = 41/124 (33.06%), Postives = 60/124 (48.39%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPE----GFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            +T H+L+   G PAAGV+V L             E+      +  ++ TN +GR       +  +  G Y   F TG Y        F+PYV +   I + Q   H+H+PLLL+P+ +TTYRGS
Sbjct:   13 LTAHILNTMSGIPAAGVQVALFK---------LNESPTPSQQFIATTETNANGRVTSWNVDLSTVESGIYTFRFETGAYFDSLGVTSFYPYVEMAVRINKGQ---HYHIPLLLAPYGYTTYRGS 124          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_RHILO (5-hydroxyisourate hydrolase OS=Rhizobium loti GN=mlr5133 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 45/128 (35.16%), Postives = 62/128 (48.44%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYC-------PE-GFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            +TTHVLD + G PAAG+ + L    G            S   +  +  TN DGRC   +    +   G Y++ F  G Y        PE  F   V I F + E+    H+HVPLL+SP+ ++TYRGS
Sbjct:   12 LTTHVLDTATGKPAAGLSIALYRLDG------------SARTHLKTVATNADGRCDAALLAGAEFRAGEYELVFAAGDYLRGQGTKLPEPAFLDSVPIRFGMAEAV---HYHVPLLISPYGYSTYRGS 124          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_BACHD (5-hydroxyisourate hydrolase OS=Bacillus halodurans GN=BH0760 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKY-CPEGF----FPYVSIV-FEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            +TTHVLD S G PAAGV V  E+W+ ++     GE+++        + TN+DGR  + +     +  G Y++ F  G Y    GF    +P++ ++          EH+HVPLL++P  ++TYRGS
Sbjct:    5 VTTHVLDTSCGKPAAGVVV--ELWRIVEG----GESELLT-----KAVTNQDGRLDKPLLTENKMARGVYELRFQVGDYFLRNGFVNQAYPFLHVIPVRFGLEDVNEHYHVPLLVAPGGYSTYRGS 119          
BLAST of CV886907 vs. ExPASy Swiss-Prot
Match: HIUH_CAUCR (5-hydroxyisourate hydrolase OS=Caulobacter crescentus GN=CC_2620 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11
Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = -3
Query:  285 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPEGFFPYVS------IVFEIRESQKREHFHVPLLLSPFSFTTYRGS 644
            +TTH+LD + G PAAGV VR+    G Q +          W+ +    T+ DGR   + G  EDL  G Y++ F  G +      P         +V +   S   +H+HVPLL+SP+ ++TYRGS
Sbjct:    4 LTTHILDQASGKPAAGVGVRVSRRDGEQTQ----------WLAE--LRTDADGRARLVAG--EDLAVGGYRLEFAIGDHFKASGLPVSDPPFLDVVVIDFAVSNLDQHWHVPLLVSPYGYSTYRGS 115          
The following BLAST results are available for this feature:
BLAST of CV886907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
HIUH_ECOLI3.759e-1236.295-hydroxyisourate hydrolase OS=Escherichia coli (s... [more]
HIUH_ECO573.759e-1236.295-hydroxyisourate hydrolase OS=Escherichia coli O1... [more]
HIUH_SCHPO8.375e-1233.06Probable 5-hydroxyisourate hydrolase OS=Schizosacc... [more]
HIUH_RHILO7.090e-1135.165-hydroxyisourate hydrolase OS=Rhizobium loti GN=m... [more]
HIUH_BACHD7.090e-1134.925-hydroxyisourate hydrolase OS=Bacillus halodurans... [more]
HIUH_CAUCR9.260e-1134.925-hydroxyisourate hydrolase OS=Caulobacter crescen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025H10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886907 ID=CV886907; Name=CV886907; organism=Citrus sinensis; type=EST; length=874bp
ACAAGACCTCCTTATTTATAATAGGGTAAACCCACTTCTCCAAGTTATAC
TGAAAATAAAAACCTAAAACACATCATAATTGACTCTAATTAAAAATAGA
AAACATCAAAATACCTAAATAAAAAAATTCTAAAATCTTAAAATAACATC
TTTTTTTTTTTTGTTCAATAAATAACAATGGCTAAATTAAACCACATAAC
CACAGCCATGACCAACCCTATTGAATATTTGCAACACAAGCACACAATGT
TTCTATTAGTCAACAAACCAACCATACAATTCTAGCTTCCACGATAGGTA
GTGAATGAGAATGGTGAGAGCAGCAGAGGAACATGAAAATGTTCTCGCTT
TTGTGACTCCCTGATCTCAAACACAATAGAAACATAGGGAAAAAATCCTT
CTGGACAGTATTTACCAGTGTTGAAAGTTATCTTGTAAAATCCAGGGTTC
AAGTCTTCAATCATGCCCATCAATTGACCACATCGTCCATCTTTATTTGT
AGTTGAAGACCCCTGGTACACCCACCCACTGACATCTGTTTCGCCAAAGA
GGGGACGTGGTTGGATGCCCTTCCACATTTCCAAACGTACCTCAACACCC
GCAGCTGGAGACCCTTGAGAAACATCCAAGACATGTGTTGTAATTGGTAG
TCGAGTTCTTGTAGGGATTTGAGATATTTTCCCTGCTGAAGCTTCAGTAG
AAGCACATAGGTGTCCTTCTATGATGCTCACACGATCTTCTGCTGTTTTT
GCAGTTGCAGAATACTGGAAAGTTGCAGAAGAAGCTTTTGCTTTAGCTGA
GAAGAGCTTTGCCAGACGTAATTCAGTTATTTTCATTTGCTCCTGAGCAG
CAATCTCAAACTCAATTATGGGCC
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