EY665633

Overview
NameEY665633
Unique NameEY665633
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665633 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.015e-11
Identity = 41/142 (28.87%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  275 WGSVSLQGLREEMEDGAVIQSDGLDG--FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRP 694
            +G  S  G R  MED    + D +DG       VFDGHGG    ++++  L+          LL   K     K A+ +A+++ D + L   E ++ +++ G+TA+   +  D LF+++VGD   ++ R G A  ++  H+P
Sbjct:   28 YGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSH--------LLRHPKFISDTKVAIDDAYKSTDSEFL---ESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKP 158
[Close]
BLAST of EY665633 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.856e-11
Identity = 48/160 (30.00%), Postives = 75/160 (46.88%), Query Frame = 2 
Query:  230 AIDAPSSLSGVAG---IRWGSVSLQGLREEMEDGAVIQSDGLDGFSFA--AVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRP 694
            A  +P S  G +      +G  S  G R  MED    + DG+DG +     VFDGHGG    +F++  L+          L+   K F   K A+ E + + D +LL + E +   D     +T + +G D L +++VGD   V+ R G A  ++  H+P
Sbjct:   47 AAGSPGSGGGFSANGKFSYGYASSPGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTN--------LIKHPKLFSDTKSAIAETYTSTDSELL-KAETSHNRDAGSTASTAILVG-DRLLVANVGDSRAVICRGGDAIAVSRDHKP 196
The following BLAST results are available for this feature:
BLAST of EY665633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
P2C45_ORYSJ6.015e-1128.87Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C59_ORYSJ7.856e-1130.00Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665633 ID=EY665633; Name=EY665633; organism=Citrus sinensis; type=EST; length=788bp
CCCACGCGTCCGCCACCACCACTTTAAAATTATTTCCTCTGGTCTCTCAA
CACAGTTGAACTCGCTCCTTCAAACTCGCTGAGTCAACCAATTAATGGCG
TTGCTGAACCAACAGTTACAGAGGTGTCTCTTAACAAGGCTCAACTATAA
CTTCAAGCCCACCGTCAAAAACAACTTTGTCAATACAACAACAGCAAGAG
CTAAAAGCCAGTGCTACTGCTCGGCGATTGCAATAGACGCGCCGTCTTCG
TTGAGTGGTGTTGCCGGAATCCGATGGGGGTCTGTAAGTTTACAGGGCCT
ACGTGAGGAAATGGAGGATGGTGCTGTTATTCAATCGGATGGCCTTGATG
GGTTCTCTTTTGCAGCTGTTTTTGATGGCCATGGTGGAGTCTCCACTGTC
AAGTTTCTTAGGGATGAGCTATACAAAGAATGTGTTGCAGCTTTACAAGG
AGGATTGCTGTTGAGTGGAAAAGATTTTGATGCCATTAAGAAGGCATTAC
AGGAGGCTTTTGAAAATGTTGATATGAAATTGTTGAATAGGCTTGAAATG
AATGCGGAGGAGGACGAATCCGGTGCAACCGCTACTGTTATGTTCATTGG
AAGGGATATTTTGTTCATCTCACATGTTGGTGACTGTTGTGTGGTTCTAT
CTCGTACTGGAAAAGCAGATGTATTGACTAATCCTCATCGGCCTTATGGA
AGCCGGCAGGTCTCACTTCAAGAAAATAAGAAAAATCAAAAAAACAGGTG
GATGGATTTCCCATGGGAAAGATATGGGGTGGACTTTG
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