CV886864

Overview
NameCV886864
Unique NameCV886864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.528e-19
Identity = 52/122 (42.62%), Postives = 71/122 (58.20%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            E G D  F     +  +E +EARALG    PVL+GP++YL L K AKG E  F  L L+D+++P+Y ++   L A G  W+Q DEP L+LDL      AF  AY+++Q     L  L+ TYF
Sbjct:  129 EFGADQQFQLGWEQLFEEVEEARALGHAVKPVLIGPLTYLWLGK-AKGAE--FDKLELLDRLLPLYGQIFQRLAAQGVEWVQIDEPILVLDLPQDWKNAFERAYNQIQR--EPLKKLLATYF 245          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_FLAJ1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.301e-19
Identity = 48/122 (39.34%), Postives = 73/122 (59.84%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            E   +  F   S K + E+KEA A+G++T PVL+GPVSYLLL K     E+ F+ + LID ++PVY E++ +L+   A +IQ DEP L L+L   +   F+  Y+E+      L +++  YF
Sbjct:  128 EFTKNQKFELFSEKILNEFKEANAVGIKTKPVLIGPVSYLLLGKEK---EEGFNRIDLIDALLPVYFEILEKLQIENAEYIQLDEPFLALNLTDKERNVFTKVYNEINVRFPKLKIVLANYF 246          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_CYTH3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=metE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.301e-19
Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARA-LGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            E   D  FS  S KA++EY EA+  +G    PVL+GPVSYLL  K     E  F+ + LI+ ++PVY +++A L+  GA WIQ DEP L++DL   + + +   Y+ L++    L  ++ TYF
Sbjct:  130 EFRKDQKFSPISEKAIREYTEAKVVIGKAAKPVLLGPVSYLLAGKEK---EAGFNRIELIENLLPVYTKLLATLQQNGAEWIQLDEPFLVMDLTVQERKTYETTYTALRNLFPSLKFIVATYF 249          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.311e-19
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   14 DVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADV 376
            D     A HK   E++EA+ LG+ T PVLVGP ++L LS   +GV+        +D ++  Y+EV A+L   GAT IQ DE  L+ DL + +   F + Y++L +   GL VL++TYF DV
Sbjct:  130 DTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATCIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV 246          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.311e-19
Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 2
Query:   32 ASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADV 376
            A  K V E+ EA+ALG++T PV++GPVSYL L K  K        +SL+ KI+PVYKE++ +LK AGA  +Q DEP L+LDL       F +AY  L  +     +++ TYF DV
Sbjct:  146 AGIKPVDEFNEAKALGVQTRPVILGPVSYLYLGKADKD-SLDLEPISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEAVQSKFKEAYDALVGA-DVPELILTTYFGDV 258          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   14 DVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADV 376
            D     A HK   E++EA+ LG+ T PVLVGP ++L LS   +GV+        +D ++  Y+EV A+L   GAT IQ DE  L+ DL + +   F + Y++L +   GL VL++TYF DV
Sbjct:  130 DTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV 246          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   14 DVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADV 376
            D     A HK   E++EA+ LG+ T PVLVGP ++L LS   +GV+        +D ++  Y+EV A+L   GAT IQ DE  L+ DL + +   F + Y++L +   GL VL++TYF DV
Sbjct:  130 DTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATRIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV 246          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19
Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYF 367
            E   D  FS +S K + EY+EA+A G++T PV++GPVS+LLL K           L L+D ++PVY EV+ EL  AG   +Q DEP L+LDL   +  A   AY  L +  + + + + TYF
Sbjct:  133 EFSHDTTFSLSSTKVIDEYEEAKAQGVDTRPVVIGPVSFLLLGKTQ---ADDLDALDLLDDLLPVYAEVLQELADAGCEAVQLDEPNLVLDLSDAERAALDQAYEAL-ADAADIELHVATYF 250          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_NEIMB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup B GN=metE PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19
Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADV 376
            E   D  F   +   VQ+ +EA+ALG++  P +VGP+++L + K    VE  F  LSL+ K++PVY E++  L  AGA WIQ DEP L +DL    ++A+ D Y+ L  S     +L+ TYF  V
Sbjct:  124 EFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKEKGAVE--FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWVEAYKDVYATL--SKVSAKILLSTYFGSV 244          
BLAST of CV886864 vs. ExPASy Swiss-Prot
Match: METE_NEIMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup A GN=metE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.631e-19
Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGLNVLIETYFADV 376
            E   D  F   +   VQ+ +EA+ALG++  P +VGP+++L + K    VE  F  LSL+ K++PVY E++  L  AGA WIQ DEP L +DL    ++A+ D Y+ L  S     +L+ TYF  V
Sbjct:  124 EFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKEKGAVE--FDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATL--SKVSAKILLSTYFGSV 244          
The following BLAST results are available for this feature:
BLAST of CV886864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
METE_PSEF52.528e-1942.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_FLAJ13.301e-1939.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CYTH33.301e-1939.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI4.311e-1940.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL4.311e-1945.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPN5.631e-1940.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP45.631e-1940.505-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD5.631e-1940.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMB5.631e-1940.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMA5.631e-1940.005-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025F10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886864 ID=CV886864; Name=CV886864; organism=Citrus sinensis; type=EST; length=400bp
TGAATTGGGACCGGATGTCAACTTCTCTTATGCATCTCACAAGGCTGTTC
AAGAGTATAAGGAAGCCAGAGCTCTTGGCATGGAAACTGTTCCTGTCCTT
GTAGGCCCTGTTTCCTATTTGTTGTTATCTAAACCAGCAAAGGGTGTAGA
GAAATCCTTTTCTCTTCTTTCCCTAATTGACAAGATTATTCCTGTCTACA
AGGAAGTTGTGGCTGAGCTAAAGGCTGCTGGTGCCACCTGGATTCAGTTT
GATGAGCCAACTCTTATCCTGGACCTTGATTCTCACAAATTACAAGCATT
TTCTGATGCATACTCAGAGCTGCAGTCATCGCTATCTGGTTTGAATGTGT
TAATTGAGACGTACTTTGCTGATGTTCCTGCAGAGACATACAAAATACTC
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