CV886848

Overview
NameCV886848
Unique NameCV886848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: ALDH3_DICDI (Aldehyde dehydrogenase family 3 comG OS=Dictyostelium discoideum GN=comG PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.872e-39
Identity = 87/231 (37.66%), Postives = 141/231 (61.04%), Query Frame = -1
Query:  269 NLKVACRRMIMGK-WGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL---SRGFIGDVPVRYPPYT 949
            ++K+  RR+I GK W  N GQ CI  D++I  K                F+G++  +S   +RI++S    RL +L       GK+V GGE D  +  IAPT+++D   DS +M +EIFGP+LPI+T + I++  + I +    L  YLF+ ++ ++ + ++   +G L+INDT +H    +LPFGG+ +SG+G+YHGK +FD+F HK+ ++   ++ F+ D+P+RYPPYT
Sbjct:  232 DIKLTARRLIWGKCW--NAGQTCIGLDYLIVHKSILEPLIEEFKVVLKEFFGEDIKKSTSFARIISSAAAERLQQLFS----MGKVVIGGEADIAERYIAPTVIVDPDLDSPLMQDEIFGPVLPIVTYENIDECLEFIQNRPHALTLYLFSRDQAIQDKVLDGTQSGSLMINDTLLHFTNPNLPFGGIGDSGIGSYHGKGTFDIFVHKRGLVQSTTKKFL-DLPLRYPPYT 455          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: AL3B2_HUMAN (Aldehyde dehydrogenase family 3 member B2 OS=Homo sapiens GN=ALDH3B2 PE=2 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 9.291e-39
Identity = 85/226 (37.61%), Postives = 127/226 (56.19%), Query Frame = -1
Query:  245 WGC--NNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL--SRGFIGDVPVRYPPYTKGKLRLLK 910
            W C  N GQ C++PD+++ + +               FYG +P  S +L  I+N   F RL  LL   +V+     GG+ +++   IAPT+L+DV     +M EEIFGP+LPI+ V  ++++   IN   KPLA Y F+N+ ++  Q +E  S+G    N+   ++++ S+PFGGV  SGMG YHGKF+FD FSH +  L    G      + YPPYT    +LL+
Sbjct:  153 WFCYFNAGQTCVAPDYVLCSPEMQERLLPALQSTITRFYGDDPQSSPNLGHIINQKQFQRLRALLGCSRVA----IGGQSNESDRYIAPTVLVDVQETEPVMQEEIFGPILPIVNVQSVDEAIKFINRQEKPLALYAFSNSSQVVNQMLERTSSGSFGGNEGFTYISLLSVPFGGVGHSGMGRYHGKFTFDTFSHHRTCLLAPSGLEKLKEIHYPPYTDWNQQLLR 374          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: ALDH1_ENTHI (Aldehyde dehydrogenase 1 OS=Entamoeba histolytica GN=ALDH1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.142e-35
Identity = 75/228 (32.89%), Postives = 127/228 (55.70%), Query Frame = -1
Query:  269 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYT 952
            +NLKVA +R+   K   N GQ C+  DH+   +                F+G++  +S+D  RI+  +   ++ +++D   V     +GGE D     + PT+L +V  D L M EEIFGP+LP++  D +++ F+++     PLA Y+FT +  + +  +  +++G +  ND+ VHL   +LPFGG  +SG+G YHGK++FD FS  +AV +     D+ ++  P+T
Sbjct:  286 VNLKVAAKRIAWAK-SINAGQICVCVDHVFVPRSIKNEFCEAVKNSFIKFFGEDQKKSEDFGRIITKSAAKKMKEIIDQSDV----YYGGEVDIENKYVQPTILQNVKIDDLCMKEEIFGPILPVIEYDTLDEVFEMVKQHPNPLACYVFTEDNDMFEHVIANINSGAIYNNDSIVHLLNPNLPFGGNCQSGIGCYHGKYTFDTFSRPRAVCNGHTSFDLSLKDWPFT 508          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: CALB_PSEAE (Probable coniferyl aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=calB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.466e-33
Identity = 79/235 (33.62%), Postives = 122/235 (51.91%), Query Frame = -1
Query:  248 INLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRYPPYTKGKLRLL 952
            + +K A  R+  GK   N GQ C++PD+++                   F+ +   ++ D + I+N     RL   LDD +  G  +     +  + R+  TLLL+V  D  +M EEIFGPLLP++  +++ED+   +N   +PLA Y F  +K  +Q+ +    +GG+ +NDT +H+A   +PFGGV  SGMG YHG   F  FS  K V S+       + YPPY K   +L+
Sbjct:  238 VPMKDAAERIAFGK-SLNAGQTCVAPDYVLVPSRRVEEFVSQYKEVVQGFFPRLS-DNPDYTAIINERQLGRLRGYLDDAREKGATLVPLFAEGQQRRLPQTLLLNVSDDMKVMQEEIFGPLLPVIPYERLEDALAYVNQRPRPLALYYFGYDKAQQQRVLHETHSGGVCLNDTLLHVAQDDIPFGGVGPSGMGHYHGHEGFLTFSKAKGVFSKPRFNAARMIYPPYGKSIQKLV 470          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: CALB_PSEUH (Coniferyl aldehyde dehydrogenase OS=Pseudomonas sp. (strain HR199 / DSM 7063) GN=calB PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 9.949e-33
Identity = 81/230 (35.22%), Postives = 129/230 (56.09%), Query Frame = -1
Query:  233 NNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG----KIVHGGER--DKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVPVRY-PPYTKGKLRLLKVLIS 901
            N GQ C++PD+++  ++                Y  + L++ D + I+N+ +F RL + L D +  G    +I    E   D    +IAPTL+++V  + L+++EEIFGPLLPI T    + + D +NS  +PLA+Y F  +   ++Q ++   +G +V+ND   H+ + +LPFGGV  SGMGAYHG + F  FSH K VL +  +G+  +    PY +    LL VL+S
Sbjct:  250 NAGQICLAPDYVLLPEESLDSFVAEATRFVAAMY-PSLLDNPDYTSIINARNFDRLHRYLTDAQAKGGRVIEINPAAEELGDSGIRKIAPTLIVNVSDEMLVLNEEIFGPLLPIKTYRDFDSAIDYVNSKQRPLASYFFGEDAVEREQVLKRTVSGAVVVNDVMSHVMMDTLPFGGVGHSGMGAYHGIYGFRTFSHAKPVLVQSPVGESNLAMRAPYGEAIHGLLSVLLS 478          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: ALDH3_BACSU (Probable aldehyde dehydrogenase aldX OS=Bacillus subtilis GN=aldX PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 4.180e-31
Identity = 79/217 (36.41%), Postives = 121/217 (55.76%), Query Frame = -1
Query:  320 SGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKN---PLESKDLSRIVNSNHFARLSKLLDDDKVSG-KIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAV 958
            S  +L  A +++ +GK+  N GQ CI+PD++   KD                + ++   P  SK  ++IVN  +F R+  L DD    G ++V GG  D +   I+PT+L +V  D  IM EEIF  +LP++  + I++  D +N   KPLA Y+F+ N+ L    ++  ++G   IND  VH +  +LPFGGV  SG+G+YHG + F  FSH+K V
Sbjct:  225 SEYDLMDAAKKIAVGKF-VNAGQTCIAPDYLFIKKDVQDRFAGILQTVVNAGFMEDDHTPDRSK-FTQIVNDRNFNRVKDLFDDAIERGAEVVFGGVFDASDRTISPTVLKNVTPDMKIMQEEIFASILPMMNYEDIDEVIDYVNDRDKPLALYVFSKNQDLIDNVLQHTTSGNAAINDVVVHFSDVNLPFGGVNTSGIGSYHGVYGFKEFSHEKGV 439          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: CALB_CAUCR (Probable coniferyl aldehyde dehydrogenase OS=Caulobacter crescentus GN=calB PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.539e-30
Identity = 76/239 (31.80%), Postives = 127/239 (53.14%), Query Frame = -1
Query:  263 GINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDKVSG----KIVHGGE--RDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLS--RGFIGDVPVRYPPYTKG 955
            G ++  A  R++ GK   N GQ C++PD+++  ++               ++     ++ D + +V   H+ R+   +DD +  G    +I   GE    +   +I PTL+LD   D  +M EEIFGP+LP+     ++++ D +N+  +PLA Y F  ++  K + +E  ++GG+ +ND   H+A  +LPFGG+  +GMGAYHG   F  FSH+KAV    +  I  +    PPY +G
Sbjct:  238 GADMATAAARVMNGKT-LNAGQICLAPDYVLAPQEDVEAFVKEAQAAVSRYF-PTIKDNPDYTAVVAQRHYDRVKGYVDDARAKGARVIEINPAGEDLSQQEHRKIPPTLILDPTDDMKVMQEEIFGPVLPVKGYKTVDEAVDYVNAHDRPLALYWFGTDEAEKDRVLERTTSGGVTVNDVIFHVAQENLPFGGIGPAGMGAYHGYDGFREFSHRKAVFQQLKKDIAPMLGLRPPYGEG 474          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: HFD1_YEAST (Putative fatty aldehyde dehydrogenase HFD1 OS=Saccharomyces cerevisiae GN=HFD1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.846e-25
Identity = 65/242 (26.86%), Postives = 126/242 (52.07%), Query Frame = -1
Query:  245 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESKDLSRIVNSNHFARLSKLLDDDK----VSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFD-IINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVLSRGFIGDVP--VRYPPYTKGKLRLLK 949
            N+K+A +R+  G +G N+GQ C+SPD+++  K   P            FY     E  D +R+++   + +    ++       V  KI    + +   L + PT++ ++  D  +M +E F P+LPI+  + ++++ + II     PL  Y+F++++    + +  + +G  V+ DT +H+ +   PFGG+  SG G Y G + F+ FSH++ +  + +  D    +RYPP +  K +L++
Sbjct:  253 NIKIALKRIFFGAFG-NSGQICVSPDYLLVHKSIYPKVIKECESVLNEFYPSFD-EQTDFTRMIHEPAYKKAVASINSTNGSKIVPSKISINSDTEDLCL-VPPTIVYNIGWDDPLMKQENFAPVLPIIEYEDLDETINKIIEEHDTPLVQYIFSDSQTEINRILTRLRSGDCVVGDTVIHVGITDAPFGGIGTSGYGNYGGYYGFNTFSHERTIFKQPYWNDFTLFMRYPPNSAQKEKLVR 491          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: LADH_METJA (Lactaldehyde dehydrogenase OS=Methanocaldococcus jannaschii GN=MJ1411 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.181e-17
Identity = 60/195 (30.77%), Postives = 105/195 (53.85%), Query Frame = -1
Query:  317 GQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPLESK-DLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 895
            GQ CIS   I+  +  A                 NPL+ K D+  +++  H   + K+++      GK++ GG+RDK      PT+L +V RD+++   E F P++PI+  ++ E+  DI NS    L + +FTN+     +F E +  GG+VIND+++     ++PFGGV++SG+G    K++ +  S+ K ++
Sbjct:  271 GQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK--ALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSL-FRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 460          
BLAST of CV886848 vs. ExPASy Swiss-Prot
Match: LADH_META3 (Lactaldehyde dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1030 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.653e-17
Identity = 57/213 (26.76%), Postives = 113/213 (53.05%), Query Frame = -1
Query:  317 NLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPXXXXXXXXXXXNFYGKNPL-ESKDLSRIVNSNHFARLSKLLDDD-KVSGKIVHGGERDKNKLRIAPTLLLDVPRDSLIMSEEIFGPLLPILTVDKIEDSFDIINSGTKPLAAYLFTNNKKLKQQFVETVSAGGLVINDTAVHLAVHSLPFGGVQESGMGAYHGKFSFDVFSHKKAVL 949
            N+  A    + GK+  N+GQ CIS   ++  ++ A                 NPL E  ++S +++ +   R+ KL++      GK++ GG+R+ +   I PT+L ++  D+++ + EIF P+LPI+ V+ + ++ +  N+    L + +FT +      F + +  GG++IN++     + ++PFGG++ SG+G    K++ D  S  K ++
Sbjct:  254 NINKAVESCMSGKF-LNSGQVCISVGRVLIEQEVADEFINKIVEKVKKLKIGNPLDEDTNISSLISLDSAERVEKLINKSIGQGGKLICGGKRENSI--IYPTIL-EITADNILANIEIFAPVLPIIRVNDMNEALNQANNSNYGLHSGVFTQDINKALYFADNLEYGGVLINNSPT-FRIDNMPFGGIKHSGLGREGIKYAIDEMSEIKTII 461          
The following BLAST results are available for this feature:
BLAST of CV886848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ALDH3_DICDI1.872e-3937.66Aldehyde dehydrogenase family 3 comG OS=Dictyostel... [more]
AL3B2_HUMAN9.291e-3937.61Aldehyde dehydrogenase family 3 member B2 OS=Homo ... [more]
ALDH1_ENTHI2.142e-3532.89Aldehyde dehydrogenase 1 OS=Entamoeba histolytica ... [more]
CALB_PSEAE4.466e-3333.62Probable coniferyl aldehyde dehydrogenase OS=Pseud... [more]
CALB_PSEUH9.949e-3335.22Coniferyl aldehyde dehydrogenase OS=Pseudomonas sp... [more]
ALDH3_BACSU4.180e-3136.41Probable aldehyde dehydrogenase aldX OS=Bacillus s... [more]
CALB_CAUCR3.539e-3031.80Probable coniferyl aldehyde dehydrogenase OS=Caulo... [more]
HFD1_YEAST5.846e-2526.86Putative fatty aldehyde dehydrogenase HFD1 OS=Sacc... [more]
LADH_METJA1.181e-1730.77Lactaldehyde dehydrogenase OS=Methanocaldococcus j... [more]
LADH_META37.653e-1726.76Lactaldehyde dehydrogenase OS=Methanococcus aeolic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025E12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886848 ID=CV886848; Name=CV886848; organism=Citrus sinensis; type=EST; length=958bp
TTTTTTTTTTTTTTTTATTTTAACTGTACTCTCATATTTTGAAACCAATC
AAATCTTGTTCAAATAAAGTTGTACAGAGAAAGAGAAAGATACTCCAAAA
TGGTTTTGAGTACCTAAAATTACGAAGAAAAATACAGAAAAAATAACATA
AAGTCAAGACAGAAACATAGAGTTATCTCGTTTATGCCTTCGACCATCCC
AGAAGGGCACGTATTATGCCAAGTAGACTACCAGATATGAGAACTTTCAG
CAATCTTAGCTTGCCCTTTGTGTATGGCGGGTATCTCACAGGCACGTCAC
CAATAAAACCTCGAGATAGAACTGCTTTTTTATGACTGAAAACATCAAAA
GAGAATTTCCCATGGTATGCTCCCATCCCACTCTCCTGGACTCCCCCAAA
TGGCAGAGAATGAACAGCAAGATGTACAGCAGTGTCATTGATAACCAAAC
CCCCTGCAGAGACAGTTTCCACAAACTGCTGCTTGAGCTTCTTGTTGTTG
GTAAATAGATAAGCAGCAAGTGGCTTTGTTCCTGAATTTATAATATCAAA
GCTGTCCTCTATTTTGTCAACCGTAAGGATGGGAAGCAAAGGACCAAATA
TCTCTTCACTCATGATCAAAGAGTCTCGCGGGACATCTAATAAGAGGGTG
GGAGCAATCCTCAGTTTGTTTTTGTCCCTTTCGCCTCCATGAACAATCTT
TCCAGAAACCTTGTCATCATCTAGGAGTTTTGACAGGCGTGCGAAGTGGT
TGGAATTGACTATGCGGGACAAGTCTTTTGATTCCAATGGATTCTTCCCG
TAAAAATTCTCCAATTCATTTTTCAGAGACTCTAGCAGCTTTGGAGCATA
ATCTTTGGTCGTTATAATGTGATCAGGAGAAATGCATGCTTGTCCATTAT
TACAACCCCACTTGCCCATAATCATCCGCCTACAGGCAACTTTTAAATTG
ATGCCCGA
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