CV886847

Overview
NameCV886847
Unique NameCV886847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: YOSF_SCHPO (Putative aldehyde dehydrogenase-like protein C21C3 OS=Schizosaccharomyces pombe GN=SPBC21C3.15c PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 66/255 (25.88%), Postives = 117/255 (45.88%), Query Frame = 2
Query:  161 KTKSYGWRVSQLKSLMKMLNEREPDIVDALRQDLDKPELESSIYEVALLKTSIKSALKELKHWMTPEKAKTSITTFPSSAEIVPEPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSS-----IRVVEGAVAETSALLDQKWDK-ICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESLKN 907
            K+ S+  R + LK+L + +   +    +   +D  K  ++++  E+ +    I   L   +  + P K   S+ T      +  EP GV+  +  WNYP   +L P++ A+ AGNA+V+K SE+   S+    ++V   +         ++ +         L      K I + G+  +A++V A+AAK LTP+ LELGGK P +      L+     ++ G +  + GQ CI  + II        ++  L N
Sbjct:   42 KSTSFAERRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANGEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVVKGSELTAWSTHQYCEMVRSLLQSMGHSPELVQCITCLPDVADHLTSHSGIKHITFIGSQPIAKLVAASAAKQLTPLCLELGGKDPCILTDDHRLEEILSIVMRGVFQ-SAGQNCIGIERIIALDGVYDTIITKLYN 295          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: BADH_SCHPO (Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe GN=meu8 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 58/167 (34.73%), Postives = 95/167 (56.89%), Query Frame = 2
Query:  416 PFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASS---SLLAKLVGEYMDLSSIRVVEGAVAETSALLD--QKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL 901
            P GV+ +I+PWN+P  ++L  +V AIA+GN +VLKPSE+AP S    +L+ K  G  +    + V+ G+  E+ A L    K   + +TG+    + +M AAA+++ P+ LELGGKSP++     +L +A        +  N G+AC +   +I  +  A ++L  L
Sbjct:  162 PRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSELAPWSCLEFALICKEAG--LPDGVLNVIIGSGKESGAALSCHPKIAYLAFTGSLATGKKIMHAAAENIVPLTLELGGKSPLIICEDADLSLAIPSAAFAIF-FNQGEACTAASRLIVHESVADEVLGGL 325          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: BADH_GADCA (Betaine aldehyde dehydrogenase OS=Gadus callarias GN=aldh9A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 57/166 (34.34%), Postives = 89/166 (53.61%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEY-MDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTKDYAPKLLESL 901
            EP GV   I  WNYPF+++      A+A GNA+V KPS + P +  +LA++  E  + +  + VV+G  AET +LL       K+ +TG+    + VM  +AK +  V LELGGKSP++      L+ A R  +M  +    GQ C +   +   ++  P+ LE +
Sbjct:  154 EPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGG-AETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEV 317          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDB_ECOLI (Aldehyde dehydrogenase B OS=Escherichia coli (strain K12) GN=aldB PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.360e-18
Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAETSALL--DQKWDKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGI--NLKVACRRMIMG--KWGCNNGQACISPDHIITTKDYAPKLLE 895
            EP GVV  I PWN+P L++   +  A+AAGN +VLKP+ + P S  LL ++VG+ +    + VV GA       L   ++  K+ +TG++ V + +M  A +++ PV LELGGKSP +F + +         + + G   +  N G+ C  P   +  +    + +E
Sbjct:  159 EPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFME 325          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDA_STAAW (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MW2) GN=aldA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLESLKN 907
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++  +       P+L E+  N
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSN 316          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDA_STAAS (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MSSA476) GN=aldA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLESLKN 907
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++  +       P+L E+  N
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSN 316          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDA_STAAN (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain N315) GN=aldA PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLESLKN 907
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++  +       P+L E+  N
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSN 316          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDA_STAAM (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=aldA PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLESLKN 907
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++  +       P+L E+  N
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSN 316          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDA_STAAC (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain COL) GN=aldA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLESLKN 907
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++  +       P+L E+  N
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSN 316          
BLAST of CV886847 vs. ExPASy Swiss-Prot
Match: ALDA_STAAB (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=aldA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.092e-17
Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 2
Query:  413 EPFGVVLIISPWNYPFLLSLDPVVGAIAAGNALVLKPSEVAPASSSLLAKLVGEYMDLSSIRVVEGAVAET-SALLDQKW-DKICYTGNSRVARIVMAAAAKHLTPVLLELGGKSPVVFDSGINLKVACRRMIMGKWGCNNGQACISPDHIITTK----DYAPKLLESLKN 907
            EP GVV  +  WN+P LL+   +  AIAAGN +V++PS   P S   +AK+  E +    + ++ G  +E+ +A+ +    DK+ +TG++ V   V  AAAKHL P  LELGGKS  +     NL +A   + +G    N G+ C +   ++  +       P+L E+  N
Sbjct:  147 EPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGIL-FNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSN 316          
The following BLAST results are available for this feature:
BLAST of CV886847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
YOSF_SCHPO8.360e-1825.88Putative aldehyde dehydrogenase-like protein C21C3... [more]
BADH_SCHPO8.360e-1834.73Probable betaine aldehyde dehydrogenase OS=Schizos... [more]
BADH_GADCA8.360e-1834.34Betaine aldehyde dehydrogenase OS=Gadus callarias ... [more]
ALDB_ECOLI8.360e-1832.34Aldehyde dehydrogenase B OS=Escherichia coli (stra... [more]
ALDA_STAAW1.092e-1733.92Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAS1.092e-1733.92Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAN1.092e-1733.92Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAM1.092e-1733.92Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAC1.092e-1733.92Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAB1.092e-1733.92Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_025E12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886847 ID=CV886847; Name=CV886847; organism=Citrus sinensis; type=EST; length=907bp
CCAAAAAAAAAAAAACAGAATTCCAAAATCCATCTGTCCTTCTCTCGCTT
TGTTAATTGCAATGGGGAGTGAGGAGGAGACGAAGAAGAAGAATGAGGTG
TTCGATGCGGAGGCGGCGAGCTTGTTCGTGAAGGAGCTGAAAGGAACTTT
TGCGTCTGGAAAAACGAAGAGCTACGGATGGAGAGTGTCTCAGTTGAAGA
GTTTGATGAAGATGCTTAACGAGCGCGAGCCGGACATCGTCGACGCTCTT
CGTCAAGATCTCGATAAGCCGGAACTTGAATCCTCCATTTACGAGGTAGC
ATTGTTGAAGACTTCTATCAAGTCAGCACTCAAGGAACTAAAACACTGGA
TGACACCAGAGAAGGCTAAAACTTCAATTACAACTTTTCCTTCATCAGCT
GAAATAGTGCCAGAACCATTTGGTGTTGTATTAATCATCTCACCATGGAA
TTATCCTTTCTTGTTGTCTCTCGATCCAGTTGTTGGGGCTATTGCAGCTG
GTAATGCTCTGGTTCTAAAGCCATCTGAAGTTGCTCCAGCATCGTCTTCA
TTGCTTGCAAAACTAGTTGGTGAATATATGGATTTGTCTTCCATAAGGGT
TGTTGAAGGGGCAGTTGCTGAAACGTCTGCACTGCTTGATCAAAAGTGGG
ATAAAATATGTTATACAGGCAATTCAAGAGTTGCACGCATTGTGATGGCT
GCAGCTGCAAAGCATCTAACACCAGTTCTTTTGGAGCTTGGAGGAAAATC
TCCAGTTGTCTTTGATTCGGGCATCAATTTAAAAGTTGCCTGTAGGCGGA
TGATTATGGGCAAGTGGGGTTGTAATAATGGACAAGCATGCATTTCTCCT
GATCACATTATAACGACCAAAGATTATGCTCCAAAGCTGCTAGAGTCTCT
GAAAAAT
back to top