EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.398e-18
Identity = 49/111 (44.14%), Postives = 62/111 (55.86%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKP---VTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D + Y+F+YDS HG +K       DY  +    K    + V+  ++P EI W   GA+YVV+STGVFT               VIISAPS DAPMF VGVN  +Y
Sbjct:   35 DPFISIDYMVYLFQYDSTHGRFKGTVKHEGDYLIVANEGKSQHKIKVYNSKDPAEIQWGAAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.398e-18
Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D   YMFKYDS HG +K  E+       ++ G K + VF  ++P  +PW + G + V+DSTGVF                V+I+APSK APMF VGVNE++Y
Sbjct:   33 DPFISVDYAAYMFKYDSTHGRYK-GEVTTSGNDLVIDGHK-IAVFQEKDPANLPWGKLGVDIVIDSTGVFKELDSAQKHLDAGAKKVVITAPSKTAPMFVVGVNEDKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.356e-18
Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFIT D   YMFKYDS HG  K+      +  TL+   K + VF  R+P ++PW E G +  +DSTGVF                V+I+APS  APMF +GVNE +Y
Sbjct:   33 DPFITVDYAAYMFKYDSTHG--KYAGDVQYEGNTLVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.356e-18
Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = 1
Query:    4 TQYGPDSGSTPRPDPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            T   PD       DPFI  + + YMFKYDSVH  W  H   +KD    L   + +  F   +P +I W   GA+ V++STGVFT               VII+APS DAPM+ +GVN  +Y P
Sbjct:   23 TMLRPDIEVVAINDPFIDAEYMAYMFKYDSVHKTWPGHVNGSKD--GFLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVIITAPSNDAPMYVMGVNHEKYNP 143          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.091e-17
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI+TD   YMFKYDS HG +       KD+  ++   K V VF  ++P  +PW + G +  +DSTG+F                V+I+APS  APM+ +GVNE  Y P
Sbjct:   33 DPFISTDYAAYMFKYDSTHGRFDGEVSHDKDH--IILNGKKVAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPSGSAPMYVMGVNEETYTP 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17
Identity = 49/109 (44.95%), Postives = 62/109 (56.88%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI T    YM KYDS HG +K   ++  D   ++ G+K +     R+P  IPW + GAEY+V+STGVFT               V+ISAPS DAPMF +GVN   YK
Sbjct:   34 DPFIETHYAAYMLKYDSQHGQFKG-TIETYDEGLIVNGKK-IRFHTERDPANIPWGQDGAEYIVESTGVFTTQEKASAHLKGGAKKVVISAPSADAPMFVMGVNNETYK 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17
Identity = 51/109 (46.79%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI      YM KYDS HG +K  ++K  D   L    K V     ++P  IPW+ETGA YVV+STGVFT               V+ISAPS DAPMF +GVN   YK
Sbjct:   34 DPFIEPHYAAYMLKYDSTHGQFKG-DIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFVMGVNHETYK 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17
Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKT--LLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDS HG +K     + +++   L+     ++V+  + P +IPW + G+ YVV+STGV+                V+ISAPS DAP F +GVNEN Y P
Sbjct:  107 DPFIDPEYMVYMFKYDSTHGRYKG----SVEFRNGQLVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSIEAASNHISAGAQRVVISAPSPDAPTFVMGVNENNYNP 214          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.175e-17
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPF+  + + Y+FKYDSVHG ++  +++ KD K ++ G K +  F  R P  I WA+ GAEY+V+STGVF                V+I+AP    P + VGVN ++Y P
Sbjct:   33 DPFLDVEYMAYLFKYDSVHGRYQG-KVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDP 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 4.147e-17
Identity = 48/108 (44.44%), Postives = 60/108 (55.56%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YM +YDS HG +K     A +   L+   K V  +  R+P  IPW+ETGA+Y+V+STGVFT               VIISAPS DAPM+ +GVN   Y
Sbjct:   34 DPFIEPKYAEYMLRYDSTHGNFKG--TIAVEGSDLVVNGKKVKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNESY 139          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P2_CAEBR6.398e-1844.14Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P1_KLULA6.398e-1843.52Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_ASHGO8.356e-1843.52Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3PC_CHLRE8.356e-1839.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ZYGRO1.091e-1740.00Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_EMENI1.425e-1744.95Glyceraldehyde-3-phosphate dehydrogenase OS=Emeric... [more]
G3P_CURLU1.425e-1746.79Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3PT_MACFA1.425e-1740.18Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P1_AGABI3.175e-1740.00Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agar... [more]
G3P_SORMA4.147e-1744.44Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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