EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.147e-17
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D   YMFKYDS HG +      + D  +L+   K V VF  R+P  +PW E   +  +DSTGVF                V+I+APS  APMF VGVNE++Y
Sbjct:   33 DPFISVDYAAYMFKYDSTHGRFAGEV--SHDENSLIIDGKKVLVFQERDPATLPWGEHNVDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.416e-17
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFIT D   YMFKYDS HG +      + D K+L+   K V VF  R+P  +PW     +  +DSTG+F                V+I+APS  APMF VGVNE++Y
Sbjct:   33 DPFITVDYAAYMFKYDSTHGRFDGE--VSHDGKSLIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.074e-17
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YM KYDS HG +K  ++K +     + G K +  +  ++P  IPW+ETGA YVV+STGVFT               V+ISAPS DAPMF +GVN   Y
Sbjct:   34 DPFIEPHYAAYMLKYDSQHGQFKG-DIKVEGNDLTING-KTIRFYTEKDPANIPWSETGAYYVVESTGVFTTTDKAKAHLKGGAKKVVISAPSADAPMFVMGVNNETY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.074e-17
Identity = 46/108 (42.59%), Postives = 58/108 (53.70%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFIT D   YMFKYDS HG +      + D K L+   K V VF  R+P  +PW     +  +DSTG+F                V+I+APS  APMF VGVNE++Y
Sbjct:   33 DPFITVDYAAYMFKYDSTHGRFDGE--VSHDGKALIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.238e-17
Identity = 51/112 (45.54%), Postives = 60/112 (53.57%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFG----EKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI T+   YM KYDS HG +K       D K L  G     K V  +  R+P  IPWAE+ A YVV+STGVFT               V+ISAPS DAPM+ +GVN   Y
Sbjct:   35 DPFIETEYAAYMLKYDSTHGQFKG------DIKVLSDGLEVNGKKVKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMYVMGVNNETY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.238e-17
Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDS HG +K   ++ K+ + L+     + VF  + P EIPW+  G  YVV++TGV+                VI++APS DAPM  +GVNE +Y P
Sbjct:  130 DPFIDPEYMVYMFKYDSTHGRYK-GTVEHKNGR-LVVDNLEINVFQCKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVIVTAPSPDAPMLVMGVNEKDYNP 237          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.238e-17
Identity = 45/108 (41.67%), Postives = 58/108 (53.70%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFITTD   YMFKYDS HG  ++      D K ++   K + V   R+P  +PW     +  +DSTGVF                V+I+APS  APMF VGVNE++Y
Sbjct:   33 DPFITTDYAAYMFKYDSTHG--RYAGEVTHDDKHIIIDGKKIAVHQERDPANLPWGSENIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16
Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVF-TXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI  + + YM K DS HG +   E+  ++ K  + G K ++V   R+P  IPW + GAEYVV+STGVF T               VIISAPS DAPMF VGVNEN Y+
Sbjct:   35 DPFIDLEYMVYMIKRDSTHGTFPG-EVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYE 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16
Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPF++T  + YM +YD+VHG  K     + D   +    KP+ VF   NP  I W E   +YVV+STG FT               V+ISAPS DAPMF +GVN   Y+
Sbjct:   32 DPFVSTTYMEYMLEYDTVHG--KFDGSLSHDETHIFVNGKPIRVFNEMNPENIKWGEEQVQYVVESTGAFTTLEKASTHLKNGVEKVVISAPSSDAPMFVMGVNHELYE 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16
Identity = 48/109 (44.04%), Postives = 61/109 (55.96%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHH-ELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YM +YD+ HG +K   E+   D   L+   K V  +  R+P  IPW+ETGA+Y+V+STGVFT               VIISAPS DAPM+ +GVN   Y
Sbjct:   34 DPFIEPKYAAYMLRYDTTHGNFKGTIEVDGAD---LVVNGKKVKFYTERDPAAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMYVMGVNNETY 139          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P2_KLULA4.147e-1742.59Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P2_KLUMA5.416e-1742.59Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_PHANO7.074e-1744.44Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P3_KLUMA7.074e-1742.59Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P_SCLSC9.238e-1745.54Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3PT_RAT9.238e-1740.91Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P2_CANGA9.238e-1741.67Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P_SCHMA1.207e-1647.27Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3P_PHYIN1.207e-1641.28Glyceraldehyde-3-phosphate dehydrogenase OS=Phytop... [more]
G3P_NEUCR1.207e-1644.04Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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