EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_PETCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petroselinum crispum GN=GAPC PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.790e-36
Identity = 74/109 (67.89%), Postives = 81/109 (74.31%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFITT+ +TYMFKYDSVHG WK  ELK KD KTLLFG+KP+TVFGVRNP E PW E GAEYVV+STGVFT               V+ISAPS +APMF VGVNE EYK
Sbjct:   34 DPFITTEYMTYMFKYDSVHGQWKKDELKVKDSKTLLFGDKPLTVFGVRNPEEDPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSGNAPMFVVGVNEKEYK 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.054e-36
Identity = 74/109 (67.89%), Postives = 81/109 (74.31%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI+T+ LT +FKYDSVHG WK HE+K KD KTLLFGEK V VFG RNP EIPW E GAEYVV+STGVFT               V+ISAPSKDAPMF VGVNE+EYK
Sbjct:   38 DPFISTESLTSLFKYDSVHGQWKKHEVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYK 146          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.161e-35
Identity = 72/109 (66.06%), Postives = 81/109 (74.31%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI+TD +TYMFKYDSVHG  K HE+K KD KTLLFGE PV VFG RNP EIPW + GA++VV+STGVFT               V+ISAPSKDAPMF VGVNE+EYK
Sbjct:   35 DPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYK 143          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.773e-27
Identity = 58/108 (53.70%), Postives = 70/108 (64.81%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFIT + +TYMFKYDS HG WK  E+       L FG  PV V+  R+P EIPW + GA++VV+STGVFT               V+ISAPSKDAPMF +GVNEN+Y
Sbjct:   38 DPFITPEYMTYMFKYDSTHGQWKKTEVTLHSEGHLTFGGNPVAVYACRDPSEIPWGKHGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVMGVNENKY 145          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Gracilaria verrucosa GN=GAPC PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.574e-24
Identity = 57/110 (51.82%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFK+DS HG +    ++ KD K ++ G K +T++G R+P EIPWAE GA+YVV+STGVFT               VIISAPSKDAPMF  GVNE++Y P
Sbjct:   35 DPFIDLEYMAYMFKFDSTHGRYAG-SVETKDGKLIVNG-KSITIYGHRDPAEIPWAEAGADYVVESTGVFTLKEKAEKHFTGGAKKVIISAPSKDAPMFVCGVNEDKYTP 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.803e-24
Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D + YMFKYDS HG +K  +++ KD K ++ G KP++VFG R+P  IPW + GA+YVV+STGVFT               VIISAPS DAPMF  GVN   YKP
Sbjct:   34 DPFIDLDYMVYMFKYDSTHGRFKG-KVETKDGKLVIEG-KPISVFGERDPAAIPWGKAGADYVVESTGVFTTIEKASLHLKGGAKKVIISAPSADAPMFVCGVNLEAYKP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.270e-23
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D + YMFK+DSVHG +K   ++AKD K ++ G KP+ VFG R+P  IPW  +GA+YVV+STGVFT               VIISAPS DAPM+  GVN + Y P
Sbjct:   34 DPFIPLDYMVYMFKFDSVHGRYKG-TVEAKDGKLIIAG-KPIAVFGERDPASIPWGASGADYVVESTGVFTTIDKASAHLKGGAKKVIISAPSADAPMYVCGVNLDAYDP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.605e-23
Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI T+   YMFKYDS HG +K  +++AKD   ++ G K + VFG R+P  IPW + GA+YVV+STGVFT               VIISAPS DAPMF VGVN + YKP
Sbjct:   34 DPFIDTEYAAYMFKYDSTHGRFKG-KVEAKDGGLIIDG-KHIQVFGERDPSNIPWGKAGADYVVESTGVFTGKEAASAHLKGGAKKVIISAPSGDAPMFVVGVNLDAYKP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.605e-23
Identity = 59/119 (49.58%), Postives = 71/119 (59.66%), Query Frame = 1
Query:   16 PDSGSTPRPDPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            P+   T   DPFI  D + YMFKYDSVHG ++  E+  KD K ++ G K +TVF  R+P  IPW   GA+YVV+STGVFT               VIISAPS DAPMF  GVN + Y P
Sbjct:    4 PEINITAVNDPFIDLDYMVYMFKYDSVHGRFEG-EVSTKDGKLVING-KAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAPSSDAPMFVCGVNLDAYDP 120          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22
Identity = 56/110 (50.91%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D + YMFKYDS HG +K   ++ KD K L    K + VFG ++P  I W E GAEYVV+STGVFT               V+ISAPS DAPMF  GVN + YKP
Sbjct:   34 DPFIDLDYMVYMFKYDSTHGRFKG-SVEVKDGK-LYINNKAIAVFGEKDPANIKWGEAGAEYVVESTGVFTTTEKAGVHLKGGAKKVVISAPSADAPMFVCGVNLDAYKP 141          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3PC_PETCR1.790e-3667.89Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TAXBA3.054e-3667.89Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR1.161e-3566.06Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PHYPA5.773e-2753.70Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GRAVE4.574e-2451.82Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_CRYCU7.803e-2452.73Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_OMPOL2.270e-2351.82Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_YARLI6.605e-2352.73Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
G3P_BOLED6.605e-2349.58Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_CRYNE4.281e-2250.91Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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