EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.592e-22
Identity = 54/110 (49.09%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI    + YMFKYDSVHG +    ++ KD K L   +KP+TVF  R+P +IPW   GAEY+V+STGVFT               ++ISAPS DAPMF  GVN ++Y P
Sbjct:   12 DPFIDLAYMVYMFKYDSVHGRFSG-SVETKDGK-LWINQKPITVFRKRDPVQIPWGSAGAEYIVESTGVFTTTEKASAHLKGGAKKIVISAPSADAPMFVCGVNLDKYDP 119          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21
Identity = 54/108 (50.00%), Postives = 69/108 (63.89%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDS HG++K  E+KA+D   ++ G+K +TVF    P  IPW++ GAEY+V+STGVFT               VIISAPS DAPMF  GVN  +Y
Sbjct:   31 DPFIALEYMVYMFKYDSTHGMFKG-EVKAEDGALVVDGKK-ITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEKY 136          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21
Identity = 55/110 (50.00%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDSVHG +K   ++AKD K  + G KPV V+G +NP +I W   G +YVV+STGVFT               VIISAPS DAPMF +G N ++Y P
Sbjct:   33 DPFINLEYMVYMFKYDSVHGRFKG-TVEAKDGKLWIQG-KPVIVYGEKNPSDIKWGAAGRDYVVESTGVFTTVEKAEGHLKGGAKKVIISAPSADAPMFVMGCNLDQYDP 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  +   YMFKYDS HG +K  E+ +KD   ++ G+  + VFG ++P  IPW + G +YV++STGVFT               VII+APS DAPMF VGVNE +Y P
Sbjct:   34 DPFIAPEYAAYMFKYDSTHGRYKG-EVTSKDDSLVIDGQS-IKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPSSDAPMFVVGVNEQKYTP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PHARH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffia rhodozyma GN=GPD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.627e-21
Identity = 53/110 (48.18%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDS HG++K   ++ KD K ++ G KP+ V+G R+P  I W   GA+YVV+STGVFT               V+ISAPS DAPMF  GVN ++Y P
Sbjct:   34 DPFIDLEYMVYMFKYDSTHGVFKG-SVEIKDGKLVIEG-KPIVVYGERDPANIQWGAAGADYVVESTGVFTTQEKAELHLKGGAKKVVISAPSADAPMFVCGVNLDKYDP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PICAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia angusta GN=GPD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.125e-21
Identity = 54/110 (49.09%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D   YMFKYDS HG +K       + K L+   K + VF  R+P  IPW + G +YV+DSTGVFT               VII+APSKDAPMF VGVN  EY P
Sbjct:   34 DPFIAPDYAAYMFKYDSTHGKFKG--TVTHEGKYLVINGKKIEVFQERDPANIPWGKEGVDYVLDSTGVFTTIEGAQKHIDAGAKKVIITAPSKDAPMFVVGVNHEEYTP 141          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.125e-21
Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDSVHG +K   ++AKD K  + G KP+ VF  ++P  IPW   GAEY+V+STGVFT               VIISAPS DAPMF  GVN + Y
Sbjct:   34 DPFIDLEYMVYMFKYDSVHGRFKG-SVEAKDGKLYVEG-KPIHVFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPSADAPMFVCGVNLDAY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 2.775e-21
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMF+YDS HG + H  +KA++ K ++ G KP+T+F  R+P  I W + GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.624e-21
Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D + YMFKYDSVHG +K   ++AKD K ++ G KP+ +F  ++P  IPW   GA+YVV+STGVFT               V+ISAPS DAPMF  GVN   Y P
Sbjct:   33 DPFIDLDYMVYMFKYDSVHGRFKG-SIEAKDGKLIVEG-KPIHIFAEKDPANIPWGSVGADYVVESTGVFT-TIDKASAHLKGGEKVVISAPSADAPMFVCGVNLETYDP 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 3.624e-21
Identity = 58/118 (49.15%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   16 PDSGSTPRPDPFITTDLLTYMFKYDSVHGLWKHH-ELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            PD       DPFI T    YM KYDS HGL+K   E+  KD   L+   K V  +  RNP +I W+ETGAEYVV+STGVFT               VIISAPS DAPM+ +GVNE++Y
Sbjct:   26 PDIEVVAVNDPFIETTYAAYMLKYDSSHGLFKGEVEVDGKD---LVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPSADAPMYVMGVNESDY 140          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P_AMAMU5.592e-2249.09Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_PANVR1.246e-2150.00Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_LYOSH1.246e-2150.00Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophy... [more]
G3P_DEBHA1.246e-2147.27Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_PHARH1.627e-2148.18Glyceraldehyde-3-phosphate dehydrogenase OS=Phaffi... [more]
G3P_PICAN2.125e-2149.09Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_PHACH2.125e-2150.93Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_FELCA2.775e-2149.07Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_PLESA3.624e-2150.00Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
G3P2_TRIKO3.624e-2149.15Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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