EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.234e-20
Identity = 52/108 (48.15%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  +   YM KYDS HG +       +D   L+   + V  +  RNP EIPWAETGAEY+V+STGVFT               VIISAPS DAPMF +GVN   Y
Sbjct:   35 DPFIEPEYAAYMLKYDSTHGQFNGDIQTVED--GLVVNSRNVKFYNKRNPEEIPWAETGAEYIVESTGVFTTTEKAKAHLKGGAKKVIISAPSADAPMFVMGVNHKSY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_SPECI (Glyceraldehyde-3-phosphate dehydrogenase OS=Spermophilus citellus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMF+YDS HG + H  +KA++ K ++ G K +++F  R+P  I W + GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMF+YDS HG + H  +KA++ K ++ G K +++F  R+P  I W + GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_DANRE (Glyceraldehyde-3-phosphate dehydrogenase OS=Danio rerio GN=gapdh PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  D + YMF+YDS HG +K  E+KA+  K ++ G   +TV+  R+P  I W + GA YVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLDYMVYMFQYDSTHGKYKG-EVKAEGGKLVIDGHA-ITVYSERDPANIKWGDAGATYVVESTGVFTTIEKASAHIKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDS HG ++   +KA++ K ++ G   +T+F  R+P  I WA+ GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLNYMVYMFKYDSTHGHFRG-TVKAENGKLVINGNA-ITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMF+YDS HG + H  +KA++ K ++ G K +++F  R+P  I W + GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.835e-20
Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDSVHG +K   ++ K+   ++ G +P+ VF  R+P  IPW   GA+YVV+STGVFT               V+ISAPS DAPM+  GVN ++Y P
Sbjct:   33 DPFIDLEYMAYMFKYDSVHGRFKG-TVEVKNGSFVVDG-RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAPSADAPMYVCGVNLDKYNP 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 8.927e-20
Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDS HG +K   +KA++ K ++ G   +T+F  R+P  I W + GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLNYMVYMFKYDSTHGHFKG-TVKAENGKLVINGNA-ITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COLLN (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum lindemuthianum GN=GPDA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.927e-20
Identity = 54/117 (46.15%), Postives = 64/117 (54.70%), Query Frame = 1
Query:   16 PDSGSTPRPDPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            PD       DPFI T    YM KYDS HG++      A+D   L+   K V  +  R+P  IPW ETGA+YVV+STGVFT               VIISAPS DAPM+ +GVNE  Y
Sbjct:   26 PDVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEI--AQDGNDLVINGKKVKFYTERDPAVIPWKETGADYVVESTGVFTTIDKAKAHLQGGAKKVIISAPSADAPMYVMGVNEKSY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.927e-20
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI    + YMFKYDS HG +K  E+  +D K ++ G+  ++VF    P EIPW + GA YVV+STGVF                V++SAPS DAPMF +GVN+++Y P
Sbjct:   34 DPFIDLQYMVYMFKYDSTHGRYKG-EVHMEDGKLIVDGQA-ISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPSPDAPMFVMGVNQDKYDP 141          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P_ERYGR5.234e-2048.15Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]
G3P_SPECI6.835e-2047.22Glyceraldehyde-3-phosphate dehydrogenase OS=Spermo... [more]
G3P_MUSPF6.835e-2047.22Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel... [more]
G3P_DANRE6.835e-2048.15Glyceraldehyde-3-phosphate dehydrogenase OS=Danio ... [more]
G3P_COLLI6.835e-2048.15Glyceraldehyde-3-phosphate dehydrogenase OS=Columb... [more]
G3P_CANFA6.835e-2047.22Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3P2_AGABI6.835e-2046.36Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agar... [more]
G3P_COTJA8.927e-2048.15Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P_COLLN8.927e-2046.15Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3PT_DANRE8.927e-2045.45Glyceraldehyde 3-phosphate dehydrogenase, testis-s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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