EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.166e-19
Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YM KYDS HG  + +     D  TL+   K +  +  R+P +IPW+ETGAEYVV+STGVFT               VIISAPS D+PMF +GVN ++Y
Sbjct:   35 DPFIEVHYAAYMLKYDSTHG--RFNGTVEFDGNTLIVNGKKIKFYAERDPAQIPWSETGAEYVVESTGVFTKQEKASLHLKGGAKKVIISAPSSDSPMFVMGVNNDQY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_USTMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ustilago maydis GN=GAPD PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YM KYDS HG++ + ++  KD K ++ G K + VF  ++P  IPW + GA YVV+STGVFT               V+ISAPS DAPM+  GVN + Y P
Sbjct:   35 DPFIDLEYMVYMLKYDSTHGVF-NGDISTKDGKLIVNG-KSIAVFAEKDPSNIPWGQAGAHYVVESTGVFTTIDKASAHIKGGAKKVVISAPSADAPMYVCGVNLDAYDP 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_TRIAT (Glyceraldehyde-3-phosphate dehydrogenase OS=Trichoderma atroviride GN=gpd1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19
Identity = 51/108 (47.22%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YM KYDS HGL+K  +++  D + L+   KP+  +  R+P  I W+ETGAEY+V+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   34 DPFIEPTYAAYMLKYDSSHGLFKG-DIEV-DGQNLVVNGKPIRFYSERDPANIKWSETGAEYIVESTGVFTTIDKAKAHLNGGAKKVIISAPSADAPMFVMGVNHKDY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDSVHG ++   ++AKD K ++ G K ++VF  R+P +IPW    A YVV+STGVFT               VIISAPS DAPMF  GVN  +Y
Sbjct:   34 DPFIPLEYMVYMFKYDSVHGRFQG-TVEAKDGKLVVNG-KEISVFSERDPAQIPWGSVEAAYVVESTGVFTSIDAASAHLQGGAKKVIISAPSGDAPMFVCGVNLEKY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schizosaccharomyces pombe GN=tdh1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDS HG +    ++ KD K ++ G   + V   R+P +I W+ +GA+YV++STGVFT               VIISAPSKDAPM+ VGVNE ++ P
Sbjct:   35 DPFIDLEYMAYMFKYDSTHGRFDG-SVEIKDGKLVIDGNA-IDVHNERDPADIKWSTSGADYVIESTGVFTTQETASAHLKGGAKRVIISAPSKDAPMYVVGVNEEKFNP 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4)

HSP 1 Score: 94.3597 bits (233), Expect = 1.989e-19
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI    + YMF+YDS HG + H  +KA++ K ++ G K +T+F  R+P  I W + GA YVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.989e-19
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDSVHG +K   ++ K  K ++ G K ++VFG ++   IPW+  GAEY+V+STGVFT               VIISAPS DAPM+  GVN + Y
Sbjct:   34 DPFIALEYMVYMFKYDSVHGRFKG-TVETKGGKLIVDG-KEISVFGEKDAGAIPWSSVGAEYIVESTGVFTTIEKASAHLKGGAKKVIISAPSADAPMYVCGVNLDSY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_GLOMM (Glyceraldehyde-3-phosphate dehydrogenase OS=Glossina morsitans morsitans GN=Gapdh PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.989e-19
Identity = 52/110 (47.27%), Postives = 62/110 (56.36%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + Y+FKYDS HG +K     A D   L+   K +TVF  R+P  I WA  GAEY+V+STGVFT               V+ISAPS DAPMF  GVN   Y P
Sbjct:   32 DPFIDVNYMVYLFKYDSTHGRFKG--TVAADGGFLVVNGKKITVFCERDPTNINWASAGAEYIVESTGVFTTIDKASAHFKGGAKKVVISAPSADAPMFVCGVNLEAYSP 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.597e-19
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI T    YM KYDS HG +K  ++K  D    + G K V  +  R+P  IPWAETGA+YV++STGVFT               VIISAPS DAPMF +GVN   YK
Sbjct:   34 DPFIETHYAAYMLKYDSTHGRFKG-DVKFSDNGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYK 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Bos taurus GN=GAPDH PE=1 SV=4)

HSP 1 Score: 93.9745 bits (232), Expect = 2.597e-19
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI    + YMF+YDS HG + +  +KA++ K ++ G K +T+F  R+P  I W + GAEYVV+STGVFT               VIISAPS DAPMF +GVN  +Y
Sbjct:   33 DPFIDLHYMVYMFQYDSTHGKF-NGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKY 138          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P_MONAN1.166e-1946.30Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_USTMA1.523e-1944.55Glyceraldehyde-3-phosphate dehydrogenase OS=Ustila... [more]
G3P_TRIAT1.523e-1947.22Glyceraldehyde-3-phosphate dehydrogenase OS=Tricho... [more]
G3P2_RHIRA1.523e-1949.07Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P1_SCHPO1.523e-1945.45Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Schi... [more]
G3P_PIG1.989e-1947.22Glyceraldehyde-3-phosphate dehydrogenase OS=Sus sc... [more]
G3P_LENED1.989e-1947.22Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P_GLOMM1.989e-1947.27Glyceraldehyde-3-phosphate dehydrogenase OS=Glossi... [more]
G3P_COCIM2.597e-1949.54Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_BOVIN2.597e-1947.22Glyceraldehyde-3-phosphate dehydrogenase OS=Bos ta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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