EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P3_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhizomucor racemosus GN=GPD3 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.597e-19
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDS HG +K   ++ KD K ++ G + + V   R+P +IPW   GA+YV++STGVFT               VIISAPS DAPMF VGVN ++Y
Sbjct:   35 DPFIDLEYMVYMFKYDSTHGRFKG-TVEHKDGKLVVNGHE-IAVHAERDPAQIPWGSHGADYVIESTGVFTTKDAASAHLKGGAKKVIISAPSADAPMFVVGVNLDKY 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.392e-19
Identity = 49/110 (44.55%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI T    YM KYDS HG +K  +++      L    K +  +  R+P  IPW + G +YVV+STGVFT               VIISAPS DAPMF +GVNE  Y+P
Sbjct:   34 DPFIETKYAAYMLKYDSTHGQFKG-DIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPSADAPMFVMGVNEKSYRP 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3PC_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Scenedesmus vacuolatus GN=GapC PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.392e-19
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + YMFKYDSVHG ++  +++   +   + GE+ +    + +P +IPW E GA+YVV+STGVFT               V+ISAPS DAPMF +GVN ++Y P
Sbjct:   27 DPFIEGEYMAYMFKYDSVHGRYEG-DVQGDKHGITINGEQ-IKTLAMMDPTQIPWGEVGADYVVESTGVFTTVDKCQAHLKGGAKKVVISAPSADAPMFVMGVNADKYDP 134          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_SCHPO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schizosaccharomyces pombe GN=gpd3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.392e-19
Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D + YMFKYDS HG ++   ++ K  K ++ G   + V   R+P  I W+ +GAEYV++STGVFT               VIISAPSKDAPMF VGVN  ++ P
Sbjct:   35 DPFIDLDYMAYMFKYDSTHGRFEG-SVETKGGKLVIDGHS-IDVHNERDPANIKWSASGAEYVIESTGVFTTKETASAHLKGGAKRVIISAPSKDAPMFVVGVNLEKFNP 142          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.392e-19
Identity = 50/110 (45.45%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + Y+FK+DS HG +K   +    +  L+   + +TVF  R+P  I WA  GAEYVV+STGVFT               V+ISAPS DAPMF  GVN + YKP
Sbjct:   22 DPFIDVNYMVYLFKFDSTHGRFKGTVVAEGGF--LVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKP 129          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_DROPS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila pseudoobscura pseudoobscura GN=Gapdh2 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.392e-19
Identity = 51/110 (46.36%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + Y+FK+DS HG +K     A +   L+   + +TVF  R+P  I WA  GAEYVV+STGVFT               V+ISAPS DAPMF  GVN + YKP
Sbjct:   32 DPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYKP 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_DROME (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Drosophila melanogaster GN=Gapdh2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.392e-19
Identity = 51/110 (46.36%), Postives = 64/110 (58.18%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + Y+FK+DS HG +K     A +   L+   + +TVF  R+P  I WA  GAEY+V+STGVFT               VIISAPS DAPMF  GVN + YKP
Sbjct:   32 DPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYIVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYKP 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 4.431e-19
Identity = 51/108 (47.22%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI      YMFKYDS HG +K  ++K  D K L+   K +  +  R+P  IPW ++GAEY+V+STGVFT               VIISAPS DAPM+ +GVNE+ Y
Sbjct:   34 DPFIEPHYAEYMFKYDSTHGRFKG-DIKV-DGKDLVIDGKRIKFYQERDPANIPWKDSGAEYIVESTGVFTTTEKASAHFKGGAKKVIISAPSADAPMYVMGVNEDTY 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19
Identity = 53/109 (48.62%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI T    YM KYDS HG +K  ++K  +    + G K V  +  R+P  IPWAETGA+YV++STGVFT               VIISAPS DAPMF +GVN   YK
Sbjct:   34 DPFIETHYAAYMLKYDSTHGRFKG-DVKFSENGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNETYK 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19
Identity = 52/111 (46.85%), Postives = 65/111 (58.56%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKP---VTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  D + YMFKYDS HG +K   + A+  K ++   K    ++V   ++P EIPW   GAEYVV+STGVFT               VIISAPS DAPMF +GVN + Y
Sbjct:   35 DPFINIDYMVYMFKYDSTHGRFKG-SVSAEGGKLIVTNGKTTHHISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P3_RHIRA2.597e-1947.22Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Rhiz... [more]
G3P_PARBA3.392e-1944.55Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3PC_SCEVA3.392e-1943.64Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_SCHPO3.392e-1946.36Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Schi... [more]
G3P2_DROSU3.392e-1945.45Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragme... [more]
G3P2_DROPS3.392e-1946.36Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P2_DROME3.392e-1946.36Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Dros... [more]
G3P1_TRIKO4.431e-1947.22Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]
G3P_COCP77.557e-1948.62Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_BRUMA7.557e-1946.85Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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