EY665621

Overview
NameEY665621
Unique NameEY665621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length378
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19
Identity = 52/116 (44.83%), Postives = 65/116 (56.03%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKP------VTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  D + YMF YDS HG +     K       L  EK       + VF +++P EI WAE GAEYV++STGVFT               V+ISAPS DAPM+ +GVNE++Y P
Sbjct:   35 DPFIELDYMVYMFNYDSTHGRFNG---KISTSAGNLVVEKEGKATHTIKVFNLKDPAEIKWAEVGAEYVIESTGVFTTIEKASAHLKGGAKKVVISAPSADAPMYVMGVNEDKYDP 147          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.870e-19
Identity = 54/108 (50.00%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  + + YMFKYDS HG +K   ++AKD K ++ G KP++V+  R+P  IP    GAEY+V+STGVFT               VIISAPS DAPMF VGVN   Y
Sbjct:   34 DPFIDLEYMVYMFKYDSTHGRFKG-TVEAKDGKLVVNG-KPISVYAERDPCCIP-GRIGAEYIVESTGVFTTKEKAGAHLTGGAKKVIISAPSADAPMFVVGVNLESY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_DROHY (Glyceraldehyde-3-phosphate dehydrogenase OS=Drosophila hydei GN=Gapdh1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.870e-19
Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + Y+FK+DS HG +K   + A+    ++ G+K +TVF  R+P  I WA  GAEYVV+STGVFT               V+ISAPS DAPMF  GVN + Y P
Sbjct:   32 DPFIDVNYMVYLFKFDSTHGRFKG-TVSAEGGFLVVNGQK-ITVFSERDPANINWASAGAEYVVESTGVFTTTEKASTHLKGGAKKVVISAPSADAPMFVCGVNLDAYSP 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhizomucor racemosus GN=GPD1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.870e-19
Identity = 52/109 (47.71%), Postives = 63/109 (57.80%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYK 369
            DPFI  D + YM KYD+VHG +    ++AKD K ++ G   + V   R+P  IPW   GA+YVV+STGVFT               VIISAPS DAPMF  GVN   YK
Sbjct:   34 DPFIPLDYMVYMLKYDTVHGRFDG-SVEAKDGKLVVNGHA-IAVSAERDPTSIPWGSAGADYVVESTGVFTTTEAASAHLKGGAKKVIISAPSADAPMFVCGVNLEAYK 140          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.870e-19
Identity = 51/110 (46.36%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEYKP 372
            DPFI  + + Y+FK+DS HG +K     A +   L+   + +TVF  R+P  I WA  GAEYVV+STGVFT               VIISAPS DAPMF  GVN + Y P
Sbjct:   32 DPFIDVNYMVYLFKFDSTHGRFKG--TVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYSP 139          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.289e-18
Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKH---HE----LKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D + Y+F+YDS HG +K    HE    L AK+ K+    +  + V+  R+P EI W  +GA+YVV+STGVFT               VIISAPS DAPMF VGVN  +Y
Sbjct:   35 DPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P3_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis briggsae GN=gpd-3 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.289e-18
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKH---HE----LKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D + Y+F+YDS HG +K    HE    L AK+ K+    +  + V+  R+P EI W   GA+YVV+STGVFT               VIISAPS DAPMF VGVN  +Y
Sbjct:   35 DPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGSAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P2_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis elegans GN=gpd-2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.289e-18
Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKH---HE----LKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D + Y+F+YDS HG +K    HE    L AK+ K+    +  + V+  R+P EI W  +GA+YVV+STGVFT               VIISAPS DAPMF VGVN  +Y
Sbjct:   35 DPFISIDYMVYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKS----QHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.289e-18
Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI+ D   YMFKYDS HG +K     + D   L+   K V VF  ++P  +PW + G +  VDSTGVF                V+I+APSK APMF VGVNE++Y
Sbjct:   33 DPFISVDYAAYMFKYDSTHGKYKGEV--SHDGSNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSKTAPMFVVGVNEDKY 138          
BLAST of EY665621 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 1
Query:   43 DPFITTDLLTYMFKYDSVHGLWKHHELKAKDYKTLLFGEKPVTVFGVRNP*EIPWAETGAEYVVDSTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFGVGVNENEY 366
            DPFI  +   YM KYDS HG++K  E+K KD   L+   K V     R+P  IPW  +GAEY+V+STGVFT               VIISAPS DAPM+ +GVNE  Y
Sbjct:   34 DPFIDPEYAAYMLKYDSSHGVFKG-EIK-KDADGLIVNGKKVKFHTERDPSAIPWKASGAEYIVESTGVFTTTEKAKAHLTGGAKKVIISAPSADAPMYVMGVNEKTY 139          
The following BLAST results are available for this feature:
BLAST of EY665621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
G3P1_GLORO7.557e-1944.83Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]
G3P_RHIMI9.870e-1950.00Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizom... [more]
G3P_DROHY9.870e-1946.36Glyceraldehyde-3-phosphate dehydrogenase OS=Drosop... [more]
G3P1_RHIRA9.870e-1947.71Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Rhiz... [more]
G3P1_DROME9.870e-1946.36Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]
G3P3_CAEEL1.289e-1846.09Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P3_CAEBR1.289e-1846.09Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P2_CAEEL1.289e-1846.09Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P1_KLUMA1.289e-1844.44Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3P_CLAPU1.684e-1848.15Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665621 ID=EY665621; Name=EY665621; organism=Citrus sinensis; type=EST; length=378bp
TGCACGCAGTACGGTCCGGATTCCGGGTCGACCCCGCGTCCGGATCCCTT
TATCACAACCGACTTATTGACATACATGTTTAAGTACGACAGTGTTCACG
GTCTATGGAAGCACCATGAATTGAAGGCTAAGGACTATAAGACCCTTCTC
TTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCATAGGAGAT
CCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGATTCCACTGGAGTCT
TTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAAAAA
GTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGGTGTCGGTGT
CAATGAAAACGAGTACAAACCATAGCTC
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