CV886809

Overview
NameCV886809
Unique NameCV886809
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOHS (S-formylglutathione hydrolase yeiG OS=Escherichia coli O9:H4 (strain HS) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.211e-65
Identity = 128/227 (56.39%), Postives = 157/227 (69.16%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECODH (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain K12 / DH10B) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 7.211e-65
Identity = 128/227 (56.39%), Postives = 157/227 (69.16%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_SHISS (S-formylglutathione hydrolase yeiG OS=Shigella sonnei (strain Ss046) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_SHIF8 (S-formylglutathione hydrolase yeiG OS=Shigella flexneri serotype 5b (strain 8401) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOSM (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSIPWGIKAFSRYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOL6 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O6 GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOL5 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSTYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECO57 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O157:H7 GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 156/227 (68.72%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF+ YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSRYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH2_ECO24 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.418e-65
Identity = 128/227 (56.39%), Postives = 157/227 (69.16%), Query Frame = -3 
Query:  252 PVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLV-SKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 926
            PVLYWLSGLTC DENF  K+GAQR A+  G+ L+ PDTSPRG  V  + D +D G GAGFYLNATQ  W  ++RMYDY+  ELP L+   F    + R +I GHSMGGHGAL + LKN  KY SVSAFAPI NP + PWG KAF++YLG +K  W E+D+ +L+ + N   +   LIDQG +D+FL DQL P    EA R     + LR QPGYDHSY+FIA+FI+D
Sbjct:   44 PVLYWLSGLTCNDENFTIKAGAQRVAAELGIVLVMPDTSPRGEQVAND-DGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNV--SDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIED 267
[Close]
BLAST of CV886809 vs. ExPASy Swiss-Prot
Match: SFGH1_ECO57 (S-formylglutathione hydrolase frmB OS=Escherichia coli O157:H7 GN=frmB PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.740e-64
Identity = 119/228 (52.19%), Postives = 160/228 (70.18%), Query Frame = -3 
Query:  252 KFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKADWEEYDATSLVSKNKNVSATILIDQGQDDKFLPDQLFPNKFEEACRSANVALLLRFQPGYDHSYFFIATFIDD 932
            K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T++ SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK  W +Y   SL+S+ + V A I++DQG  D F  +QL     E+ C+  N+  L+R+  GYDHSY+F+++FI +
Sbjct:   42 KLPVLYWLSGLTCNEQNFITKSGVQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMNHFPA--TAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENKEAWLDYHPVSLISQGQRV-AEIMVDQGLSDDFYAEQLRTQNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGE 265
The following BLAST results are available for this feature:
BLAST of CV886809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH2_ECOHS7.211e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECODH7.211e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_SHISS9.418e-6556.39S-formylglutathione hydrolase yeiG OS=Shigella son... [more]
SFGH2_SHIF89.418e-6556.39S-formylglutathione hydrolase yeiG OS=Shigella fle... [more]
SFGH2_ECOSM9.418e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOL69.418e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOL59.418e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECO579.418e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECO249.418e-6556.39S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH1_ECO572.740e-6452.19S-formylglutathione hydrolase frmB OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025D01_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T7_D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886809 ID=CV886809; Name=CV886809; organism=Citrus sinensis; type=EST; length=934bp
TTTTACACCATTTAGTTATTACTGCAAATTCTGTCAGTAGTTCAAAAGCA
TACACACCAGACCGACAATACAAGTAAACAGTTCAAAGTTGGTCTAAATG
ATTTACATGGCTCCAGATTCTCAAAACACAAAATCTAAAAAGTTACAGCC
TGGGAGCTTGAGCATGGTGGCGGATGTGACCATCACAGATTTCTGAACCA
GGAAATCTCAAGCAGTTAAAGCCTAAGAGCTTGAGCATGATGGTGGATGT
GATCATCAATGAAAGTAGCAATGAAAAAGTAGGAGTGATCATAACCAGGC
TGAAATCGCAACAAGAGTGCAACGTTGGCACTCCGGCATGCCTCCTCAAA
CTTGTTTGGGAACAGCTGATCAGGCAAGAATTTGTCATCCTGACCCTGAT
CAATCAAGATGGTGGCAGATACATTCTTGTTCTTTGAAACCAGAGATGTG
GCATCATATTCCTCCCAATCAGCTTTGTTACTACCAAGATAATTTGTAAA
AGCCTTCTGACCCCAGGGACAGTTGACAGGATTGCAAATTGGAGCAAAGG
CAGATACAGACTTATACTTGTCAAGATTTTTCAGATAGATTGTCAAAGCA
CCATGCCCACCCATTGAGTGACCAAATATGGATGCTCGAGAAGTTTCAAG
CTGTGGAAAATTTTCACTCAGAAGTTTGGGCAATTCCTTGACAACATAGT
CATACATACGCCAGTTCTTCCACTTCTCCTGTGTAGCATTAAGATAAAAT
CCAGCACCTACACCAAAATCCCAGCTATCTGCCTCTCCTTCCACATTCAG
GCCTCTTGGAGATGTATCAGGGGCAATCAGAGCCACACCTTCAGCGGAAG
CAGCACGTTGAGCTCCTGACTTAGCTATAAAATTTTCATCAGTGCAGGTA
AGACCAGAGAGCCAGTAAAGCACAGGGAATTTGT
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