EG026650

Overview
NameEG026650
Unique NameEG026650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG026650 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 51/173 (29.48%), Postives = 77/173 (44.51%), Query Frame = 2
Query:   65 SWDPTLVNPCTWFHVTCDSNN-HVIRLDLGNSNISGTLGPEVGQ-LQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP-------------------VDGPFRSFPMESFENNKL 520
            +W+ T+    +W  +TC  NN  V  L L  S + G L  +  + L  L+ + L  N + G IP  + +L  + S+  ++N   G IP   ++   L  L L+ N L+G+IP  L  L+ L    + NN L G IP                   V    +SFP  SF+ N L
Sbjct:   46 NWNSTIPICASWTGITCSKNNARVTALRLPGSGLYGPLPEKTFEKLDALRIISLRSNHLQGNIPSVILSLPFIRSLYFHENNFSGTIPPVLSH--RLVNLDLSANSLSGNIPTSLQNLTQLTDLSLQNNSLSGPIPNLPPRLKYLNLSFNNLNGSVPSSVKSFPASSFQGNSL 216          
BLAST of EG026650 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 2
Query:  203 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 466
            LQ L L  N   G IP ELGNL +L  +D+++N L G IP SF     L+ L L+ N+LTGSIP     L  L V D++ N L G +P
Sbjct:  161 LQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPG--FVLPALSVLDLNQNLLTGPVP 246          
BLAST of EG026650 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  143 DLGNSNISGT-LGPEV--GQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 466
            +L   N+ G  LGPEV      +L  + L  N    KIP+++  L  L S+D+  NK  G IP+   +L SL+ L L  N L+GS+P      S L++ DVS N L G +P
Sbjct:  180 NLQELNLGGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLP 290          
BLAST of EG026650 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 2
Query:  140 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV--DGPFRSFPMESFENNKLNGP 529
            +D  N++I G++   +     LQ L L  N+ +G IP+ L +LKSL  M +  N L G+IP  F +L  +  + L++N L+G +P  +  LS L    + NN L G + V  D P +     + ENN  NGP
Sbjct:  105 MDFSNNHIGGSIPSTLPV--SLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGELDVLQDLPLKDL---NVENNLFNGP 231          
BLAST of EG026650 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 2
Query:  143 DLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP---------VDGPFRSFPMESFENNKLNG 526
            D+ N N S      +  ++ L  L L  N+++G IP  +G   SL  +D+  NKL G IP S  NL+ L  L L NN L GS+P +      L   DVS N L G++P         ++    +F +E  +N  L+G
Sbjct:  275 DISNGNSSLEF---IKDMKSLSILVLRNNNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQKG--QSLSNVDVSYNDLSGSLPSWVSLPNLNLNLVANNFTLEGLDNRVLSG 406          
BLAST of EG026650 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 50/173 (28.90%), Postives = 77/173 (44.51%), Query Frame = 2
Query:   41 KDPTNVLQSWDPTLVNPCTW-FHVTCD-------SNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDI-----------------------SGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 466
            KDP +   +W  T      +  ++TCD       S+ HVIR+ L + N++G + PE  +L+HL+ L+L  N +                       SG  PK L  L  L ++ +  N+  G IP     L  L+ L L +N  TG +  +L  L +L    +S+N   G IP
Sbjct:   54 KDPCSGEGTWIVTTYTTKGFESNITCDCSFLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMRLEDLSFMGNRLSGPFPKVLTRLTMLRNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTGPLTEKLGLLKNLTDMRISDNNFTGPIP 226          
The following BLAST results are available for this feature:
BLAST of EG026650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
Y3868_ARATH3.276e-1129.48Probable inactive receptor kinase At3g08680 OS=Ara... [more]
TMM_ARATH4.279e-1145.45Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN... [more]
Y1143_ARATH5.588e-1137.84Probable LRR receptor-like serine/threonine-protei... [more]
SRF1_ARATH7.299e-1134.85Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
Y5614_ARATH9.533e-1133.58Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH9.533e-1128.90Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BA05FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026650 ID=EG026650; Name=EG026650; organism=Citrus sinensis; type=EST; length=753bp
CTCTGAAGGAAATGCTTTGCATGCCTTGAGAAGCAGGTTTAAGGACCCCA
CAAATGTGTTGCAGAGCTGGGACCCAACACTGGTTAATCCCTGCACTTGG
TTCCATGTCACCTGTGATTCCAACAATCATGTGATTCGTTTGGACTTGGG
TAACTCTAATATTTCTGGAACTTTGGGGCCTGAGGTTGGCCAGCTCCAGC
ATCTGCAGTACTTGGAGCTTTACATGAATGACATAAGTGGGAAAATTCCG
AAAGAGTTAGGTAATTTGAAAAGCCTTGTCAGCATGGATATGTATCAGAA
TAAACTGGAAGGAGAAATACCAAAGTCCTTTGCCAATTTGAAGTCACTTA
AATTTCTGCGGTTGAACAACAACAAACTAACAGGATCAATTCCGAGGGAG
CTGACCACCCTGTCGGACCTCAAAGTTTTTGATGTTTCTAACAATGGTCT
CTGTGGGACAATCCCTGTTGATGGTCCTTTTAGAAGCTTTCCTATGGAGA
GTTTTGAAAATAATAAACTCAATGGACCAGAGCTGCAAGGACTGGTGCCT
TATGATTTTGGATGCTGAAGAAGGTTGAAAACCCTCCGTCTTCTATTGAA
GACCATAATGTTAAAGACTCGTATAGGGTAAAATTATATTGTGTGCATCA
GCTTGATCGAATGGCTAGATATATTATGTCAGCGGCAGTGACTGTTCATG
TATGAAGTAACTAAAGCAATTAAAATAAGATTATGTAAGCTTATTTAAGA
ATC
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