EY665614
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.988e-20 Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 280 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA--GELEY------FTDTTTLFIVEMIFIGWAEGRR 582
WFPG P LDGS PGDFGFDPLGL + PE +SEI HCRWAML G+ +PE L + W G+ Y + + T+ +E + I +AE +R
Sbjct: 48 WFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR 156 HSP 2 Score: 35.039 bits (79), Expect = 2.988e-20 Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDG 784
FDPLG+ S+ P K +EL+ KEIKNG++ + G
Sbjct: 172 FDPLGF-SKDPAKFEELKLKEIKNGRLAMLAFVG 204
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.875e-20 Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 1
Query: 223 AGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633
A T+ ++ SA+ + P+R L+ F G PP +L G PGD+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P
Sbjct: 44 ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVTDPIYP 199 HSP 2 Score: 33.4982 bits (75), Expect = 3.875e-20 Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG + PE EL+ KEIKNG++ F G V
Sbjct: 203 FDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFV 238
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.056e-20 Identity = 43/109 (39.45%), Postives = 55/109 (50.46%), Query Frame = 1
Query: 280 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSW--YTAGELEYFTDTT------TLFIVEMIFIGWAEGRR 582
W PG P +LDGS PGDFGFD LGLG P L +SE++HCRWAML GI +PE L + W G+ Y T+ +E + I + E +R
Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157 HSP 2 Score: 35.039 bits (79), Expect = 5.056e-20 Identity = 16/27 (59.26%), Postives = 22/27 (81.48%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKM 763
FDPLG+ S+ P K +EL+ KEIKNG++
Sbjct: 173 FDPLGY-SKDPAKFEELKVKEIKNGRL 198
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.878e-19 Identity = 52/155 (33.55%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 223 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633
A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P
Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGEIVDPLYP 191 HSP 2 Score: 33.8834 bits (76), Expect = 1.878e-19 Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG R P+ EL+ KEIKNG++ F G V
Sbjct: 195 FDPLGLAER-PQAFAELKVKEIKNGRLAMFSMFGFFV 230
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.176e-19 Identity = 49/134 (36.57%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGA 678
P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + + ++ I WA A ++ G V + G D YPGGA
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----AQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193 HSP 2 Score: 33.113 bits (74), Expect = 3.176e-19 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG PE EL+ KEIKNG++ F G V
Sbjct: 194 FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 229
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.130e-19 Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 1
Query: 298 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKL-TGTDVGYPGGA 678
PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + + ++ I WA +I G V + L D+ YPGG+
Sbjct: 65 PPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAI-WA-----TQVILMGAVEGYRVAGEGPLGEAEDLLYPGGS 194 HSP 2 Score: 33.4982 bits (75), Expect = 4.130e-19 Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG + PE EL+ KEIKNG++ F G V
Sbjct: 195 FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFV 230
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.371e-19 Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 268 NRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633
+RPL+ F GS PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG L+Y + + ++ ++I +G EG R A P DPI+P
Sbjct: 53 DRPLYLGPFSGS-PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG--GPLGEVEDPIYP 190 HSP 2 Score: 32.3426 bits (72), Expect = 5.371e-19 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG PE EL+ KE+KNG++ F G V
Sbjct: 194 FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFV 229
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.373e-19 Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 1
Query: 229 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633
T+ VS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P
Sbjct: 38 TKQVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYP 188 HSP 2 Score: 32.3426 bits (72), Expect = 5.373e-19 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG PE EL+ KE+KNG++ F G V
Sbjct: 192 FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFV 227
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.985e-19 Identity = 46/133 (34.59%), Postives = 65/133 (48.87%), Query Frame = 1
Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGELEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGA 678
P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG + + L + I WA + ++ G + + G D YPGGA
Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWA-----SQVVLMGLIEGYRVGGGPLGEGLDKIYPGGA 193 HSP 2 Score: 33.113 bits (74), Expect = 6.985e-19 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG PE EL+ KEIKNG++ F G V
Sbjct: 194 FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 229
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.985e-19 Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 1
Query: 232 RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633
+ VS S+ PNR + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ G L+Y + + ++ +++ +G EG R A +P DP++P
Sbjct: 43 KPVSSSSPWYGPNRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--EPLGEVVDPLYP 192 HSP 2 Score: 33.4982 bits (75), Expect = 6.985e-19 Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 2
Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793
FDPLG + PE EL+ KEIKNG++ F G V
Sbjct: 196 FDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231 The following BLAST results are available for this feature:
BLAST of EY665614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665614 ID=EY665614; Name=EY665614; organism=Citrus sinensis; type=EST; length=802bpback to top |