EY665614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.010e-19 Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGA 678 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + + ++ I WA + ++ G V + G D YPGGA Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----SQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 165 HSP 2 Score: 33.113 bits (74), Expect = 7.010e-19 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE EL+ KEIKNG++ F G V Sbjct: 166 FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 201
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.096e-19 Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 229 TRSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 ++SVS + P+R + F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL++ G+ W+ AG L+Y + + ++ +++ +G EG R A P TDPI+P Sbjct: 30 SKSVSSGSPWYGPDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG--GPLGEVTDPIYP 180 HSP 2 Score: 32.3426 bits (72), Expect = 9.096e-19 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE EL+ KE+KNG++ F G V Sbjct: 184 FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFV 219
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.106e-19 Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 298 PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ SW+ AG L+Y + + ++ ++I +G EG R A P TDPI+P Sbjct: 45 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYP 170 HSP 2 Score: 30.8018 bits (68), Expect = 9.106e-19 Identity = 17/37 (45.95%), Postives = 20/37 (54.05%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPL PE EL+ KEIKNG++ F G V Sbjct: 174 FDPLALAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 209
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.180e-18 Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 226 GTRSVSVSAAAA--DPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 G +SV+ S + P+R L+ F G PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG +L + ++ ++I +G EG R A P TDPI+P Sbjct: 50 GKKSVAASIDSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAG--GPLGEVTDPIYP 203 HSP 2 Score: 31.9574 bits (71), Expect = 1.180e-18 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG P+ EL+ KEIKNG++ F G V Sbjct: 207 FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFV 242
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.181e-18 Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 265 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGA 678 P+RP + P S P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + + ++ I WA ++ G V + G D YPGGA Sbjct: 52 PDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQVVLMGFVEGYRVGGGPLGEGLDPIYPGGA 193 HSP 2 Score: 31.9574 bits (71), Expect = 1.181e-18 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG P+ EL+ KEIKNG++ F G V Sbjct: 194 FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFV 229
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.181e-18 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGA 678 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PE+L+K G+ W+ AG L+Y + + ++ I WA ++ G V + G D YPGGA Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAI-WA-----CQVVLMGFVEGYRVGGGPLGEGLDKIYPGGA 193 HSP 2 Score: 33.113 bits (74), Expect = 1.181e-18 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE EL+ KEIKNG++ F G V Sbjct: 194 FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 229
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.534e-18 Identity = 49/139 (35.25%), Postives = 67/139 (48.20%), Query Frame = 1 Query: 265 PNRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPS--WYTAGELEYFTDTTTLF------------IVEMIFIGWAE------GRRWADIIKPG 606 P+R ++ P S PE+L+G + GD+G+DP GLG PE E++H RWAMLGAAG IPE L K G P W+ G L +T F + E++ +G AE G + D + PG Sbjct: 65 PDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPG 203 HSP 2 Score: 35.4242 bits (80), Expect = 1.534e-18 Identity = 17/40 (42.50%), Postives = 25/40 (62.50%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLVSTH 802 FDPLG ++ PE+G L+ KEIKNG++ F G + + Sbjct: 206 FDPLGL-AKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAY 244
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.536e-18 Identity = 46/127 (36.22%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P TDP++P Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG--GPLGEVTDPLYP 192 HSP 2 Score: 33.113 bits (74), Expect = 1.536e-18 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE EL+ KEIKNG++ F G V Sbjct: 196 FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 231
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.536e-18 Identity = 45/127 (35.43%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A +P DP++P Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--EPLGEVVDPLYP 191 HSP 2 Score: 33.4982 bits (75), Expect = 1.536e-18 Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG + PE EL+ KEIKNG++ F G V Sbjct: 195 FDPLGL-AEDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.998e-18 Identity = 55/158 (34.81%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 220 TAGT-RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 TAG ++V S+ P+R + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P DP++P Sbjct: 38 TAGKPKTVQSSSPWYGPDRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVVDPLYP 192 HSP 2 Score: 33.113 bits (74), Expect = 1.998e-18 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE EL+ KEIKNG++ F G V Sbjct: 196 FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFV 231 The following BLAST results are available for this feature:
BLAST of EY665614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665614 ID=EY665614; Name=EY665614; organism=Citrus sinensis; type=EST; length=802bpback to top |