EY665614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.881e-17 Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 265 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 P+R L+ PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAG--GPLGEVVDPLYP 190 HSP 2 Score: 30.0314 bits (66), Expect = 7.881e-17 Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE +++ KE+KNG++ F G V Sbjct: 194 FDPLGLAD-DPEAFADVKVKELKNGRLAMFSMFGFFV 229
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.024e-16 Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 P +L G PGD+G+D GL +DP T N + E++HCRW MLGA G PEL + G+ W+ AG L+Y + + ++ +++ +G EG R A P DP++P Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVIDPLYP 191 HSP 2 Score: 34.6538 bits (78), Expect = 1.024e-16 Identity = 19/37 (51.35%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE ELE KEIKNG++ F G V Sbjct: 195 FDPLGLAD-DPEAFAELEVKEIKNGRLAMFSMFGFFV 230
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.411e-15 Identity = 49/154 (31.82%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 220 TAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSW-------YTAGELEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 TA T+ V D + L P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W ++ G L+Y + + ++ +++ +G EG R A P DP++P Sbjct: 38 TAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG--GPLGEVVDPLYP 189 HSP 2 Score: 30.0314 bits (66), Expect = 1.411e-15 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG + E EL+ KEIKNG++ F G V Sbjct: 193 FDPLGLADDA-EAFAELKVKEIKNGRLAMFSMFGFFV 228
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15 Identity = 52/148 (35.14%), Postives = 71/148 (47.97%), Query Frame = 1 Query: 265 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGA 678 P+RP + P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG L+Y + + ++ I WA ++ G V + G D YPGGA Sbjct: 51 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAI-WA-----CQVVLMGAVEGYRVGGGPLGEGLDQLYPGGA 192
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12 Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 220 TAGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAG 504 T R +V AA + P+R + F + PE+L G PGD+G+D GL +DP+T + E++H RWA+LGA GI PELL++ G+ P W+ AG Sbjct: 18 TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAG 120
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 1 Query: 217 ATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 459 A T +++ A R LWFP PP +L G GD GFDP GL +DP T +E+ HCR +ML G +PELL Sbjct: 353 ANITTNLAMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433 HSP 2 Score: 70.0922 bits (170), Expect = 1.637e-11 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 268 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGE 507 + PLWFP + P WL+G GD GFDP GL +DP+T +E+ H R AML G +P+ L K GI WY A + Sbjct: 1 SHPLWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK-GI-----WYEAAQ 74
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.945e-12 Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 1 Query: 352 GLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGE-------LEYFTDTT--------TLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG L+Y + + ++ ++I +G EG R A P TDPI+P Sbjct: 74 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAG--GPLGEVTDPIYP 181 HSP 2 Score: 31.9574 bits (71), Expect = 7.945e-12 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG PE EL+ KE+KNG++ F G V Sbjct: 185 FDPLGLAD-DPEALAELKVKELKNGRLAMFSMFGFFV 220
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.596e-12 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 295 TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAG 504 +PP +L G PGD+G+D GL +DPET N + E++HCRWA+ G PELL + G+ W+ AG Sbjct: 63 SPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAG 133
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11 Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAG 504 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K +G+ P W+ AG Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAG 136
BLAST of EY665614 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.735e-11 Identity = 46/164 (28.05%), Postives = 73/164 (44.51%), Query Frame = 1 Query: 226 GTRSVSVSAAAADPNRPLWFPGSTP--------PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLT-----KLGILNTPSWYTAG---------------ELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP 633 G ++VS S+++A+ + P +T P G PGD+G+D GL +DPET + + E++H R +LGA G+ PELL K G + W+ AG L + + V+++ +G EG R P DP++P Sbjct: 43 GAKAVSKSSSSANQ---FYGPDATSGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFG--DAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPLYP 199 HSP 2 Score: 31.187 bits (69), Expect = 1.735e-11 Identity = 17/37 (45.95%), Postives = 21/37 (56.76%), Query Frame = 2 Query: 683 FDPLGWGSRSPEKGKELETKEIKNGKMGNFGWDGGLV 793 FDPLG P+ EL+ KEIKNG++ F G V Sbjct: 203 FDPLGLAD-DPDTFAELKVKEIKNGRLAMFACLGFFV 238 The following BLAST results are available for this feature:
BLAST of EY665614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665614 ID=EY665614; Name=EY665614; organism=Citrus sinensis; type=EST; length=802bpback to top |