CV886767

Overview
NameCV886767
Unique NameCV886767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.379e-25
Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = -3
Query:  256 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 729
            +SGGH+NPAVTFG F+   +SL+R +LY +AQ LG+     L+K      +V  G    A  LS G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +W +HW++WVGPLIG  +A   +++
Sbjct:  106 VSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYG--GGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQY 273          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = -3
Query:  259 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 729
            ISGGH+NPAVTFG F+   +SL+R +LY  AQ LG+     L+K   +G        A  +S+G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V   S +W + W++WVGP IG  +A + ++
Sbjct:  105 ISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 271          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = -3
Query:  259 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSS---GVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 732
            ++SGGH+NPA+T    +   +SL R + Y +AQLLG+     +L  VT         LS+    VG     V E+++T   +  V+A+  D   G  G+ A + +GF +    L G  F GA MNPA SF PA+++ ++ NHWV+W GPL+G  LA ++YE
Sbjct:   61 HVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGRPGSAA-LPVGFSLALGHLFGIPFTGAGMNPARSFAPAVITRNFTNHWVFWAGPLLGAALAALLYE 220          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.094e-24
Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = -3
Query:  238 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 729
            +SGGH+NPA+T    VG  ISLLR + Y +AQL+G+     +L  +  G      A   L++      AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  +A I+Y +     S
Sbjct:   63 VSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAAVAAILYFYLLFPNS 229          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.429e-24
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = -3
Query:  256 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA---LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 732
            ++SG H+NPAVT    VG ++S LR   Y  AQLLG+     +L  +T  +     A   L +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:   61 HVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAAILHEITPVEIRGDLAVNALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSLLYNY 221          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.867e-24
Identity = 67/168 (39.88%), Postives = 96/168 (57.14%), Query Frame = -3
Query:  259 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 729
            ISGGH+NPAVTFG F+   +SL+R ILY +AQ LG+     L+K   +         A  L++G      +  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V   S +W + W++WVGP IG  +A + ++
Sbjct:  100 ISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 266          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.867e-24
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = -3
Query:  256 SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 726
            SG H NPAVT    VG +ISL R + Y  AQL G+TV   LL  VT G   +T     + +      AV  E+V+T  LV  V+A+ +D ++ +LG+ A + IG  V    L G  F G SMNPA SFGPA++   +  HW++WVGPL G  LA ++Y F
Sbjct:   74 SGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFAS-MDSRQ-TLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 3.184e-24
Identity = 64/169 (37.87%), Postives = 96/169 (56.80%), Query Frame = -3
Query:  256 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 729
            ISGGH+NPAVTFG  +   +S++R ++Y +AQ LG  V   ++K +     N     A  ++SG     A+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++W GP IG   A   +++
Sbjct:   96 ISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQY 263          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 66/169 (39.05%), Postives = 95/169 (56.21%), Query Frame = -3
Query:  256 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 729
            ISGGH+NPAVTFG F+   +SLLR ++Y IAQ  G+     L+K    G        A +++ G     A   E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++      WD+HW++WVGP +G   A   +++
Sbjct:   96 ISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVF-SATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQY 263          
BLAST of CV886767 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = -3
Query:  256 SGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 726
            SG H NPAVT    VG +ISL R + Y  AQL+G+TV   LL  V  G   +T     + + V    AV  E+++T  LV  V+A+  D ++ S G+ A + IG  V    L G  F G SMNPA SFGPA++   +  HWV+WVGPL+G  LA ++Y F
Sbjct:   77 SGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFAST-DSRQTS-GSPATM-IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKFTVHWVFWVGPLMGALLASLIYNF 233          
The following BLAST results are available for this feature:
BLAST of CV886767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PIP23_ORYSJ8.379e-2539.77Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP26_MAIZE1.094e-2439.88Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
MIP_CHICK1.094e-2437.89Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_PIG1.094e-2437.50Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP2_RAT1.429e-2437.65Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
PIP25_ORYSJ1.867e-2439.88Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
AQP6_RAT1.867e-2443.13Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
PIP26_ORYSJ3.184e-2437.87Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA4.158e-2439.05Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
AQP6_HUMAN4.158e-2443.13Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_025B03_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_025_T3_B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886767 ID=CV886767; Name=CV886767; organism=Citrus sinensis; type=EST; length=857bp
CAAAGCAATTGAAGTGCGAGTAGAAATACAAAGCCATAGCCTGGGACTCC
ATAATTATCGCGATACAATAATCCAGCAGCTCATGACGATGGAAACAGAT
CAACGGCCATAAATTAAACACAAATTAAAAATAAAAAGAAAGAACCTCGG
TAAAAGCAAATTAAATACAACATCCGTGCAAACTCACATAGATGGCAAGC
TTTTAGCTTAGTACTCGGTTGTTGGGAGCTGCTCGTGAGACTGGTTAATG
AAGAAGAACTCGTAGACGATGCCAGCTAGCCCACCACCGATGAGTGGCCC
GACCCAGTAGACCCAGTGGTTGTCCCAGCTCCAGCTTACCAAAGCTGGCC
CGAATGACACTGCTGGGTTCATTGAAGCTCCATCAAACGCCCCGCCCGCC
AAGATGTTGGCTCCTACAATGAAACCAATTGCAATTGGTGCAATTGTCCC
CAAGCTTCCCTTCTTTGGGTCCAGGGCTGTGGCATACACTGTGTACACTA
GTCCGAATGTCATCACGATCTCGAAAACGACTGCGTTCCATGCACCAACT
CCAGATGAGAGAGCAAAAGCAGATGTGGTCTGGCCGTTGGTAACGAACTT
AAGAAGCAAGCATGCGACGGTGGATCCAAGAAGCTGGGCGATCCAGTAGA
GGATGCCTCGTAGAAGGGAGATGTTACCTCCAACGAAGGCGCCAAAGGTG
ACAGCAGGATTAACGTGGCCACCGGAAATGTTGGCGCCAACGGCGACAGC
AACGAANAGGGCGAAAGCGTGAGCAACAGAGGCGGCGACGAGGCCGGAGG
GGGTGTTGGCGCCGTTGTGAGTGAGCTTGTTGAAAGCCATGCCCGAGCCT
TCACCGG
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