EL492458

Overview
NameEL492458
Unique NameEL492458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length181
Libraries
Library NameType
Citrus sinensis flesh cDNA-AFLP Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_CRYNE (Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EL492458 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1 
Query:   13 IQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 153
            IQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   30 IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EL492458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
UBIQ_GEOCY6.660e-2097.87Ubiquitin OS=Geodia cydonium PE=3 SV=1[more]
UBIQ_FELCA6.660e-2097.87Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1[more]
UBIQ_ENCCU6.660e-2097.87Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074... [more]
UBIQ_EIMBO6.660e-2097.87Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_DROME6.660e-2097.87Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1... [more]
UBIQ_DICDI6.660e-2097.87Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_CRYNE6.660e-2097.87Ubiquitin OS=Cryptococcus neoformans GN=UBI1 PE=1 ... [more]
UBIQ_CRIGR6.660e-2097.87Ubiquitin OS=Cricetulus griseus PE=3 SV=1[more]
UBIQ_COPCO6.660e-2097.87Ubiquitin OS=Coprinus congregatus PE=1 SV=1[more]
UBIQ_CHICK6.660e-2097.87Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC0682 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC0682, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EL492458 ID=EL492458; Name=EL492458; organism=Citrus sinensis; type=EST; length=181bp
GACTGCGTAGTGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAGCG
TTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTCGCGGATT
ACAACATTCAGAAGGAATCAACTCTTCATCTGGTTTTGCGTCTGAGGGGT
GGCATGCAGATTTTTGTTACTCAGGACTCAT
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