EY665597

Overview
NameEY665597
Unique NameEY665597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.344e-11
Identity = 45/125 (36.00%), Postives = 61/125 (48.80%), Query Frame = 1
Query:  346 SGAIPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNLTGTIPXXXXXXXXXXXXXXXXXXXXGSIPSATFITHTLKYVDLRGNQLSGGFP 720
            SG +  E+G L  LQ L L  N + GEIP ELG+L EL  + L  N + G IP  LG L KL+ L+L+ N+L+G IP                          T  +  L+ +D+  N+LSG  P
Sbjct:   88 SGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIP-------------------------MTLTSVQLQVLDISNNRLSGDIP 187          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: LRC58_HUMAN (Leucine-rich repeat-containing protein 58 OS=Homo sapiens GN=LRRC58 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.344e-11
Identity = 59/161 (36.65%), Postives = 84/161 (52.17%), Query Frame = 1
Query:   94 LKFVGLRGNQLSGAFPFFIFNKSSLQDLDLSDNALSGE--IPANICSS--LPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGAIPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNLT 564
            L+ + + GN L+   P  +  +  L+ L   +N L G   +P  +  S     L+  +LS N F   +P++L +   LQ L L  N    +IP EI NL  L+ LYLG N ++ EIPPELGNL  L  + L +N++Q  IP  L  L  L+ L L  N LT
Sbjct:   70 LQLLDVSGNALTALGPELLALRG-LRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLSGNCFQE-VPASLLELRALQTLSLGGNQLQ-SIPAEIENLQSLECLYLGGNFIK-EIPPELGNLPSLNYLVLCDNKIQ-SIPPQLSQLHSLRSLSLHNNLLT 225          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.755e-11
Identity = 45/134 (33.58%), Postives = 63/134 (47.01%), Query Frame = 1
Query:  175 LDLSDNALSGEIPANICSSLPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGAIPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNLTGTIP 576
            L L  + L G +P     +L  L+  SL  N   G IPS  S    L+ L L  N FSG IP  +  L  +  + LG N+  G IP  + +   L  ++L  N+L G IP+       L+   +S N L G+IP
Sbjct:   70 LRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIPE---ITLPLQQFNVSSNQLNGSIP 200          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: LRC58_MOUSE (Leucine-rich repeat-containing protein 58 OS=Mus musculus GN=Lrrc58 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11
Identity = 58/161 (36.02%), Postives = 83/161 (51.55%), Query Frame = 1
Query:   94 LKFVGLRGNQLSGAFPFFIFNKSSLQDLDLSDNALSG--EIPANICSS--LPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGAIPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNLT 564
            L+ + + GN L+   P  +   S L+ L   +N L G   +P  +  S     L+  +LS N F   +P++L +   LQ L L  N    +IP EI NL  L+ LYLG N ++ EIPPEL NL  L  + L +N++Q  +P  L  L  L+ L L  N LT
Sbjct:   65 LQLLDVSGNSLTALGPELL-TLSGLRTLLARNNRLGGPGSLPKGLAQSPLCRSLQVLNLSGNCFQE-LPASLLELRALQTLSLGGNQLQ-SIPAEIENLRSLECLYLGGNFIK-EIPPELANLPSLNYLVLCDNKIQ-SVPPQLSQLHSLRSLSLHNNLLT 220          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: LAP4_DROME (Protein lap4 OS=Drosophila melanogaster GN=scrib PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11
Identity = 63/190 (33.16%), Postives = 92/190 (48.42%), Query Frame = 1
Query:   64 IPSPTFTMYTLKFVGLRGNQLSGAFPFFIFNKSSLQDLDLSDNALSGEIPANICSSLPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGA------------------------IPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNL 561
            +P   F ++ L+ +GL  N++ G  P  I N  +L +LD+S N +  +IP +I   L  L+    S N     +PS  S+   L +LGL  ND S                          +P+ I  LTKL+ L LG N ++ ++PP LG L  L  +WL  N+LQ  +P +LG L KL  L +S N L
Sbjct:   52 LPKNFFRLHRLRKLGLSDNEI-GRLPPDIQNFENLVELDVSRNDIP-DIPDDI-KHLQSLQVADFSSNPIPK-LPSGFSQLKNLTVLGL--NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIE-DLPPYLGYLPGLHELWLDHNQLQ-RLPPELGLLTKLTYLDVSENRL 233          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 51/160 (31.87%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  100 FVGLRGNQLSGAFPFFIFNKSSLQDLDLSDNALSGEIPA--NICSSLPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGAIPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNLTGTI 573
            +V   G+    ++   + N S ++ + L    L GE+    N+ +SL  +++   S N   G IPS L     LQ L LS N+F+G IP+ + +L  L  + L  N L G+IP    +L  +  + LS N L G +P  + NL+ L  L L  N+L+G +
Sbjct:   56 WVASGGDPCGESWQGVLCNASQVETIILISANLGGELGVGLNMFTSLKAMDF---SNNHIGGSIPSTLP--VSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGEL 210          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: GEFV_DICDI (Ras guanine nucleotide exchange factor V OS=Dictyostelium discoideum GN=gefV PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   61 SIPSPTFTMYTLKFVGLRGNQLSGAFPFFIFNKSSLQDLDLSDNAL--SGEIPANICSSLPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGAIPKEIGNLTKLQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNL 561
            S+P+    + +L  + L+ N+ +  FP  +     L  L+LS N +  S        S LP LE   L  N F    P  + +   L++L L  ND    IP +IGNL  L EL+L  N++  ++P  +G L  L  ++L  N++ G +PQ+   L+KL +L L  N+L
Sbjct:  203 SLPNSFSNLVSLTSLNLKSNKFT-CFPPSLCTLDKLVHLNLSCNQILVSPSDHTLGVSLLPSLEKLELQHNRF-AHFPMDILEIVSLRVLKLQDNDID-KIPDKIGNLLNLNELFLSENKIT-QLPSTIGELINLRKLYLEYNKI-GSLPQEFSKLSKLNILILHNNDL 366          
BLAST of EY665597 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 1
Query:  196 LSGEIPANICSSLPFLEYFSLSQNMFHGGIPSALSKCTYLQILGLSFNDFSGAI-PKEIGNLTK-LQELYLGRNRLQGEIPPELGNLAELELMWLSENELQGGIPQDLGNLAKLKMLQLSLNNLTGTIP 576
            L G IP      L  L+  SL  N   G +PS +     L+ L L  N+FSG +    + +++K L  L L  N L G IP  L NL+++ +++L  N   G  P D  +L  +K++ LS NNL+G IP
Sbjct:   85 LYGSIPPATLGKLDALKVLSLRSNSLFGTLPSDILSLPSLEYLYLQHNNFSGELTTNSLPSISKQLVVLDLSYNSLSGNIPSGLRNLSQITVLYLQNNSFDG--PIDSLDLPSVKVVNLSYNNLSGPIP 211          
The following BLAST results are available for this feature:
BLAST of EY665597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
SERK4_ARATH1.344e-1136.00Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
LRC58_HUMAN1.344e-1136.65Leucine-rich repeat-containing protein 58 OS=Homo ... [more]
Y3288_ARATH1.755e-1133.58Probable inactive receptor kinase At3g02880 OS=Ara... [more]
LRC58_MOUSE2.292e-1136.02Leucine-rich repeat-containing protein 58 OS=Mus m... [more]
LAP4_DROME2.292e-1133.16Protein lap4 OS=Drosophila melanogaster GN=scrib P... [more]
SRF1_ARATH5.107e-1131.88Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
GEFV_DICDI5.107e-1131.95Ras guanine nucleotide exchange factor V OS=Dictyo... [more]
Y5516_ARATH8.711e-1135.66Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-D08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665597 ID=EY665597; Name=EY665597; organism=Citrus sinensis; type=EST; length=834bp
CAACTTGGGAATCTTTCGTCTCTACAATCACTCAATCTGAGTTTTAATCG
ACTTTCTGGTTCCATTCCCTCCCCCACCTTCACCATGTATACACTGAAAT
TCGTTGGTCTCCGTGGAAATCAGCTCTCCGGCGCTTTCCCTTTTTTCATA
TTCAACAAGTCTTCTTTACAAGATCTTGATCTCAGTGACAATGCACTTTC
TGGTGAAATTCCTGCAAATATCTGCAGTAGTCTTCCTTTTCTAGAATACT
TTTCTTTGTCTCAAAACATGTTTCATGGAGGAATACCGTCTGCTCTATCA
AAGTGCACATATTTGCAAATATTAGGTTTGTCATTCAATGATTTCTCGGG
GGCCATACCTAAAGAAATCGGCAATTTGACCAAACTTCAGGAATTATATC
TTGGCCGTAACAGACTCCAAGGAGAAATTCCTCCAGAGCTTGGCAATCTT
GCCGAATTGGAGCTGATGTGGTTATCAGAAAACGAACTCCAAGGAGGTAT
TCCACAGGATTTGGGGAATCTTGCAAAATTGAAGATGTTACAGCTGTCCC
TGAATAACTTGACTGGCACCATCCCTTCTCAACTCGGGAATCTTTCGTCT
CTACAATCACTCAATCTGAGTTTTAATCGACTGTCTGGTTCCATTCCCTC
CGCCACCTTCATTACGCATACACTGAAATACGTTGATCTCCGTGGAAATC
AGCTCTCCGGCGGCTTCCCTTCTTTCATCTTCAACAAGTCTTCTTTACAA
AATCTTGATCTCAGTTACAATGCACTGTCCTGTGAAAACCTTGCAAATAT
CTGCAGAAATCTTCTTTTTCTAAAAAACTTTCTT
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