EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803) GN=trpB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.332e-23 Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQ 187 SVAGPHPYPMMVRDFH VIG+ETR+QAL+KWGG PD+L+ACVGGGSNAMGLF++F+ + Sbjct: 208 SVAGPHPYPMMVRDFHRVIGQETRQQALKKWGGLPDILLACVGGGSNAMGLFYDFIDE 265
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROMA (Tryptophan synthase beta chain OS=Prochlorococcus marinus GN=trpB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.188e-21 Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHAVIG+E ++Q LE +G PDVL+ACVGGGSNAMGLFH F+ S Sbjct: 212 SVAGPHPYPMLVRDFHAVIGEEAKKQCLEAFGRSPDVLLACVGGGSNAMGLFHPFIEDRS 271
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROMP (Tryptophan synthase beta chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.082e-21 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHP+PM+VRDFHAVIG+E ++Q LE +G PD+L+ACVGGGSNAMGLFH FV + S Sbjct: 211 SVAGPHPFPMIVRDFHAVIGEEAKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKEKS 270
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNPW (Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH7803) GN=trpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.056e-20 Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPM+VRDFHAVIG+ETR+Q E +G PDVL+ACVGGGSNAMGLFH FV Sbjct: 212 SVAGPHPYPMLVRDFHAVIGQETRQQCREAFGRLPDVLMACVGGGSNAMGLFHPFV 267
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROMT (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL2A) GN=trpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.056e-20 Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHAVIG+ET++Q + +G PDVL+ACVGGGSNAMGLFH FV S Sbjct: 213 SVAGPHPYPMLVRDFHAVIGEETKQQCKQAFGRSPDVLLACVGGGSNAMGLFHSFVEDKS 272
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROMS (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain AS9601) GN=trpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.056e-20 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHP+P +VRDFHAVIG+ET++Q LE +G PD+L+ACVGGGSNAMGLFH FV + S Sbjct: 212 SVAGPHPFPKIVRDFHAVIGEETKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKETS 271
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROM2 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9215) GN=trpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.056e-20 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHP+P +VRDFHAVIG+ET++Q LE +G PD+L+ACVGGGSNAMGLFH FV + S Sbjct: 212 SVAGPHPFPKIVRDFHAVIGEETKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKETS 271
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROM1 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.056e-20 Identity = 44/60 (73.33%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHAVIG+ET++Q + +G PDVL+ACVGGGSNAMGLFH FV S Sbjct: 213 SVAGPHPYPMLVRDFHAVIGEETKQQCKQAFGRSPDVLLACVGGGSNAMGLFHSFVEDKS 272
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROM0 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9301) GN=trpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.379e-20 Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHP+P +VRDFHAVIG+ET++Q LE +G PD+L+ACVGGGSNAMGLFH FV + S Sbjct: 212 SVAGPHPFPKIVRDFHAVIGEETKKQCLESFGSFPDILLACVGGGSNAMGLFHPFVKETS 271
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNJB (Tryptophan synthase beta chain OS=Synechococcus sp. GN=trpB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.801e-20 Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP +VR FH VIG+ETR+Q EKWGG PDVL+ACVGGGSNA+GLF+EFV Sbjct: 210 TVAGPHPYPKLVRAFHDVIGQETRQQCQEKWGGLPDVLLACVGGGSNALGLFNEFV 265 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |