EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROMM (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.801e-20 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHAVIG+E R+Q E +G PDVL+ACVGGGSNAMGLFH FV S Sbjct: 232 SVAGPHPYPMLVRDFHAVIGQEARQQCAEAFGRLPDVLLACVGGGSNAMGLFHPFVQDRS 291
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROM5 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9515) GN=trpB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.801e-20 Identity = 42/60 (70.00%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHP+PM+VRDFHAVIG+E ++Q +E +G PD+L+ACVGGGSNAMGLFH FV + S Sbjct: 212 SVAGPHPFPMIVRDFHAVIGEEAKKQCVESFGSLPDILLACVGGGSNAMGLFHPFVKEKS 271
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS3 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9311) GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.352e-20 Identity = 45/60 (75.00%), Postives = 48/60 (80.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHAVIG E R Q E +G PDVL+ACVGGGSNAMGLFH FV S Sbjct: 214 SVAGPHPYPMLVRDFHAVIGNEAREQCKESFGRLPDVLLACVGGGSNAMGLFHPFVQDTS 273
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROM4 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9211) GN=trpB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.352e-20 Identity = 42/56 (75.00%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPM+VRDFH+VIG+ET++Q E +G PDVL+ACVGGGSNAMGLFH F+ Sbjct: 212 SVAGPHPYPMLVRDFHSVIGEETKQQCKEAFGRSPDVLLACVGGGSNAMGLFHSFI 267
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNPX (Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH8102) GN=trpB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.011e-20 Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPM+VRDFHAVIG+E R+Q E +G PDVL+ACVGGGSNAMGLFH FV Sbjct: 214 SVAGPHPYPMLVRDFHAVIGQEARQQCREAFGRLPDVLMACVGGGSNAMGLFHPFV 269
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNSC (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9605) GN=trpB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.842e-20 Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SVAGPHPYPM+VRDFHAVIG+E+++Q E +G PDVL+ACVGGGSNAMGLFH FV Sbjct: 214 SVAGPHPYPMLVRDFHAVIGEESKQQCQEAFGRLPDVLMACVGGGSNAMGLFHPFV 269
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS9 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9902) GN=trpB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.842e-20 Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHPYPM+VRDFHAVIG+E ++Q E +G PDVL+ACVGGGSNAMGLFH FV S Sbjct: 214 SVAGPHPYPMLVRDFHAVIGQEAKQQCEEAFGRLPDVLMACVGGGSNAMGLFHPFVQDTS 273
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PROM9 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9312) GN=trpB PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.842e-20 Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SVAGPHP+P +VRDFHAVIG+ET++Q E +G PD+L+ACVGGGSNAMGLFH F+ + S Sbjct: 212 SVAGPHPFPKIVRDFHAVIGEETKKQCQESFGSLPDILLACVGGGSNAMGLFHPFIKETS 271
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPW (Tryptophan synthase beta chain OS=Pseudomonas putida (strain W619) GN=trpB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.524e-19 Identity = 44/60 (73.33%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF ++IGKETR Q EK G PD LIACVGGGSNAMGLFHEF+ +S Sbjct: 198 TVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLIACVGGGSNAMGLFHEFLEDES 257
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPU (Tryptophan synthase beta chain OS=Pseudomonas putida GN=trpB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.600e-19 Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF ++IGKETR Q EK G PD L+ACVGGGSNAMGLFHEF+ + S Sbjct: 198 TVAGPHPYPAMVRDFQSIIGKETRAQLQEKEGRLPDSLVACVGGGSNAMGLFHEFLEEPS 257 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |