EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LEPIC (Tryptophan synthase beta chain OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=trpB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 S GPHP+P +VRDF +VIG E+R+Q + P+ +IACVGGGSNA+G+F+ F+ Sbjct: 192 SSIGPHPFPTIVRDFQSVIGIESRKQFKKVNDKLPNAVIACVGGGSNAIGMFYGFI 247
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PARD8 (Tryptophan synthase beta chain OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=trpB PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.806e-11 Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWG-GKPDVLIACVGGGSNAMGLFHEFVTQD 190 S GPHPYP MV +VI +E ++Q LEK G PD LIACVGGGSNA G + FV + Sbjct: 193 STVGPHPYPDMVARLQSVISEEIKKQLLEKEGRDHPDYLIACVGGGSNAAGTIYHFVDDE 252
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CHLTR (Tryptophan synthase beta chain OS=Chlamydia trachomatis GN=trpB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.582e-11 Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 S GP PYP +VR F +VI E + Q G PD+LIAC+GGGSNA+G FH F+ Sbjct: 187 SALGPLPYPDIVRFFQSVISAEVKEQIHAVAGRDPDILIACIGGGSNAIGFFHHFI 242
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_BLOFL (Tryptophan synthase beta chain OS=Blochmannia floridanus GN=trpB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.582e-11 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHP+P +V++F +IG ET Q PD +IAC+GGGSNA+G+F F+ Sbjct: 190 TVAGPHPFPTIVKEFQRIIGSETYNQIQTHEKKLPDAVIACIGGGSNAIGIFSGFI 245
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJR (Tryptophan synthase beta chain OS=Campylobacter jejuni (strain RM1221) GN=trpB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.903e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 S GP+PYP MV F ++IGKE + Q L+K K D +IA VGGGSNA G+F++F+ ++ Sbjct: 187 SAVGPYPYPKMVMHFQSIIGKECKMQ-LQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDEN 245
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJJ (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=trpB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.903e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 S GP+PYP MV F ++IGKE + Q L+K K D +IA VGGGSNA G+F++F+ ++ Sbjct: 187 SAVGPYPYPKMVMHFQSIIGKECKMQ-LQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDEN 245
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJE (Tryptophan synthase beta chain OS=Campylobacter jejuni GN=trpB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.903e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 S GP+PYP MV F ++IGKE + Q L+K K D +IA VGGGSNA G+F++F+ ++ Sbjct: 187 SAVGPYPYPKMVMHFQSIIGKECKMQ-LQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDEN 245
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJD (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=trpB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.903e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 S GP+PYP MV F ++IGKE + Q L+K K D +IA VGGGSNA G+F++F+ ++ Sbjct: 187 SAVGPYPYPKMVTHFQSIIGKECKMQ-LQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDEN 245
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_CAMJ8 (Tryptophan synthase beta chain OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=trpB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.903e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 S GP+PYP MV F ++IGKE + Q L+K K D +IA VGGGSNA G+F++F+ ++ Sbjct: 187 SAVGPYPYPKMVMHFQSIIGKECKMQ-LQKLNKKVDYIIAAVGGGSNAAGIFYDFIKDEN 245 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |