EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_RHOPS (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain BisB5) GN=trpB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.364e-18 Identity = 41/56 (73.21%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYPMMVRDF VIG+E R Q LE G PD LIAC+GGGSNAMGLFH F+ Sbjct: 201 TVAGPHPYPMMVRDFQEVIGQEVREQILETEGRLPDSLIACIGGGSNAMGLFHPFL 256
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METLZ (Tryptophan synthase beta chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=trpB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.364e-18 Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQD 190 SV GPHP+PM+VRDF +VIG+ETRRQ LEK G PD L+ACVGGGSNA+G+F+ + D Sbjct: 189 SVVGPHPFPMIVRDFQSVIGEETRRQCLEKEGRLPDTLVACVGGGSNAIGMFYPMLNDD 247
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_STRGG (Tryptophan synthase beta chain OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=trpB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQD 190 +VAGPHP+P MVRDFH VIG E RRQ LE+ G PD +ACVGGGSNA+GLFH F+ + Sbjct: 203 TVAGPHPFPAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFIPDE 261
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_RHOPT (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain TIE-1) GN=trpB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYPMMVRDF AVIG+E R Q ++ G PD L+AC+GGGSNAMGLFH F+ Sbjct: 201 TVAGPHPYPMMVRDFQAVIGQEVREQIMQAEGRLPDSLVACIGGGSNAMGLFHPFL 256
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_RHOPA (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris GN=trpB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYPMMVRDF AVIG+E R Q ++ G PD L+AC+GGGSNAMGLFH F+ Sbjct: 201 TVAGPHPYPMMVRDFQAVIGQEVREQIMQAEGRLPDSLVACIGGGSNAMGLFHPFL 256
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PSEF5 (Tryptophan synthase beta chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF AVIGKETR Q + G PD L+AC+GGGSNAMGLFH F+ S Sbjct: 198 TVAGPHPYPAMVRDFQAVIGKETREQMQAQEGRLPDSLVACIGGGSNAMGLFHPFLDDKS 257
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_METAC (Tryptophan synthase beta chain 1 OS=Methanosarcina acetivorans GN=trpB1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.092e-17 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV GPHPYPM+VRDF +VIGKE + QA+EK G PD +IAC GGGSNAMG FH F+ Sbjct: 196 SVVGPHPYPMIVRDFQSVIGKEVKEQAMEKEGRLPDSIIACAGGGSNAMGTFHPFI 251
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_STRCO (Tryptophan synthase beta chain OS=Streptomyces coelicolor GN=trpB PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.427e-17 Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHP+P MVRDFH VIG E RRQ LE+ G PD IACVGGGSNA+GLFH F+ Sbjct: 203 TVAGPHPFPAMVRDFHRVIGVEARRQLLEQAGRLPDAAIACVGGGSNAIGLFHAFI 258
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_STRAW (Tryptophan synthase beta chain OS=Streptomyces avermitilis GN=trpB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.427e-17 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHP+P MVRDFH VIG E RRQ LE+ G PD +ACVGGGSNA+GLFH F+ Sbjct: 203 TVAGPHPFPAMVRDFHRVIGVEARRQILERAGRLPDAAVACVGGGSNAIGLFHAFI 258
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_PSESY (Tryptophan synthase beta chain OS=Pseudomonas syringae pv. syringae GN=trpB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.863e-17 Identity = 41/60 (68.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF AVIGKETR Q + G PD L+AC+GGGSNAMGLFH F+ S Sbjct: 200 TVAGPHPYPAMVRDFQAVIGKETRDQLQAQEGRLPDSLVACIGGGSNAMGLFHPFLDDKS 259 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |