EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPH (Tryptophan synthase beta chain OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.178e-17 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF A+IG E R Q +EK G PD L+ACVGGGSNA+GLF+ F+ S Sbjct: 195 TVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGHLPDALVACVGGGSNAIGLFYPFLNDQS 254
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPC (Tryptophan synthase beta chain OS=Legionella pneumophila (strain Corby) GN=trpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.178e-17 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF A+IG E R Q +EK G PD L+ACVGGGSNA+GLF+ F+ S Sbjct: 195 TVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIGLFYPFLNDQS 254
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LEGPA (Tryptophan synthase beta chain OS=Legionella pneumophila (strain Paris) GN=trpB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.178e-17 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGPHPYP MVRDF A+IG E R Q +EK G PD L+ACVGGGSNA+GLF+ F+ S Sbjct: 195 TVAGPHPYPQMVRDFQAIIGVEARAQHMEKTGRLPDALVACVGGGSNAIGLFYPFLNDQS 254
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_RHOP5 (Tryptophan synthase beta chain OS=Rhodopseudomonas palustris (strain BisA53) GN=trpB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.151e-17 Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYPMMVRDF +VIG E R Q ++ G PD LIAC+GGGSNAMGLFH F+ Sbjct: 201 TVAGPHPYPMMVRDFQSVIGHEVREQIMQLEGRLPDSLIACIGGGSNAMGLFHPFL 256
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METRJ (Tryptophan synthase beta chain OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.151e-17 Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP MVRDF +VIG+ETR Q + + G PD L+AC+GGGSNAMGLFH F+ Sbjct: 209 TVAGPHPYPAMVRDFQSVIGRETREQMIAQEGRIPDSLVACIGGGSNAMGLFHPFL 264
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_AQUAE (Tryptophan synthase beta chain 1 OS=Aquifex aeolicus GN=trpB1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.151e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV GPHP+PM+VRDF +VIG+ET+ Q L+K G PD ++ACVGGGSNAMG+F+ FV Sbjct: 193 SVVGPHPFPMIVRDFQSVIGRETKEQILQKEGRLPDAIVACVGGGSNAMGIFYPFV 248
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_VESOH (Tryptophan synthase beta chain OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=trpB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.421e-17 Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 ++AGPHPYPMMVRDF ++IGKE + Q ++ GG PD L+ACVGGGSNA+GLF+ F+ Sbjct: 195 TIAGPHPYPMMVRDFQSIIGKEAKAQFHDQVGGLPDALVACVGGGSNAIGLFYAFI 250
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_METMA (Tryptophan synthase beta chain 1 OS=Methanosarcina mazei GN=trpB1 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.080e-17 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV GPHPYPM+VRDF +VIG+E + QA+EK G PD +IAC GGGSNAMG F+ F+ Sbjct: 196 SVVGPHPYPMIVRDFQSVIGREVKEQAMEKEGRLPDTIIACAGGGSNAMGTFYPFI 251
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_THETN (Tryptophan synthase beta chain OS=Thermoanaerobacter tengcongensis GN=trpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.247e-17 Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV GPHPYP MVRDF VIG ET+ Q LEK G PD ++ACVGGGSNAMG+F+ F+ Sbjct: 187 SVVGPHPYPTMVRDFQRVIGDETKEQILEKEGRLPDYVVACVGGGSNAMGIFYPFI 242
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_OLICO (Tryptophan synthase beta chain OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=trpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.247e-17 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQ 187 +VAGPHPYP MVRDF +VIG ETR Q + G PD L+AC+GGGSNAMGLFH F+ + Sbjct: 201 TVAGPHPYPAMVRDFQSVIGHETREQMMAAEGRLPDSLVACIGGGSNAMGLFHPFLDE 258 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |