EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_EXIS2 (Tryptophan synthase beta chain OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.247e-17 Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQD 190 SV GPHP+P +VRDF AVIG+ETR Q LEK G P+ ++ACVGGGSNA+G+FH F+ + Sbjct: 195 SVLGPHPFPEIVRDFQAVIGQETRTQILEKEGKLPEAIVACVGGGSNAIGMFHPFIDDE 253
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_BEII9 (Tryptophan synthase beta chain OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.247e-17 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQ 187 + AGPHPYP MVRDF VIG+ETR Q LE+ G PD L AC+GGGSNA+GLFH F+ + Sbjct: 211 TAAGPHPYPAMVRDFQCVIGEETRTQMLEREGRLPDSLFACIGGGSNAIGLFHPFLDE 268
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_OCEIH (Tryptophan synthase beta chain OS=Oceanobacillus iheyensis GN=trpB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV GPHP+P +VRDF +VIGKET+ Q+++K G PD ++ACVGGGSNAMG+F+ F+ Sbjct: 195 SVVGPHPFPKIVRDFQSVIGKETKEQSMKKIGSLPDAVVACVGGGSNAMGMFYPFI 250
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METNO (Tryptophan synthase beta chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=trpB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.577e-16 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP MVRDF AVIG+ET+ Q L G P+ L+AC+GGGSNAMGLFH F+ Sbjct: 202 TVAGPHPYPAMVRDFQAVIGRETKEQMLALEGRLPNSLVACIGGGSNAMGLFHPFL 257
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_NITMU (Tryptophan synthase beta chain OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=trpB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.060e-16 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYPMMVRDF A+IG+E Q E +G +PD LIACVGGGSNA+GLF+ ++ Sbjct: 195 TVAGPHPYPMMVRDFQAIIGREAITQMQEDYGRQPDALIACVGGGSNAIGLFYPYL 250
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METFK (Tryptophan synthase beta chain OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=trpB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.060e-16 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYPMMVRDF AVIG E ++Q E G +PD +IACVGGGSNAMG+F+ ++ Sbjct: 195 TVAGPHPYPMMVRDFQAVIGTEAKQQMQELIGRQPDAVIACVGGGSNAMGIFYPYI 250
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_THET8 (Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEF 178 SV GPHPYPMMVRDF +VIG+E +RQ+LE +G PD LIA VGGGSNA+GLF F Sbjct: 212 SVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPF 266
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_THET2 (Tryptophan synthase beta chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpB PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEF 178 SV GPHPYPMMVRDF +VIG+E +RQ+LE +G PD LIA VGGGSNA+GLF F Sbjct: 198 SVVGPHPYPMMVRDFQSVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPF 252
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_METPB (Tryptophan synthase beta chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=trpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP MVRDF +VIG ET++Q L G PD L+AC+GGGSNAMGLFH F+ Sbjct: 209 TVAGPHPYPAMVRDFQSVIGIETKQQMLALEGRLPDSLVACIGGGSNAMGLFHPFL 264
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LACLS (Tryptophan synthase beta chain OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=trpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SV GPHP+P +VRD+ AVIG+E R Q LEK PD L+ACVGGGSN+MGLF+ FV +S Sbjct: 194 SVLGPHPFPQIVRDYQAVIGQEARAQFLEKENKLPDALVACVGGGSNSMGLFYPFVNDES 253 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |