EL492435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_LACLA (Tryptophan synthase beta chain OS=Lactococcus lactis subsp. lactis GN=trpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 SV GPHP+P +VRD+ AVIG+E R Q LEK PD L+ACVGGGSN+MGLF+ FV +S Sbjct: 194 SVLGPHPFPQIVRDYQAVIGQEARAQFLEKENKLPDALVACVGGGSNSMGLFYPFVNDES 253
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_ACICA (Tryptophan synthase beta chain OS=Acinetobacter calcoaceticus GN=trpB PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP +VRDF ++IG+E RRQ E+ G PD L+ACVGGGSNA+GLF+ F+ Sbjct: 196 TVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFL 251
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_ACIAD (Tryptophan synthase beta chain OS=Acinetobacter sp. (strain ADP1) GN=trpB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGPHPYP +VRDF ++IG+E RRQ E+ G PD L+ACVGGGSNA+GLF+ F+ Sbjct: 196 TVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFL 251
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB1_PYRFU (Tryptophan synthase beta chain 1 OS=Pyrococcus furiosus GN=trpB1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.691e-16 Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 SV GPHPYP +VRDF +VIG+E + Q LE G PDV++ACVGGGSNAMG+F+ FV Sbjct: 185 SVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV 240
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_XYLFT (Tryptophan synthase beta chain OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=trpB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGP PYP MVRDF+A++G+E R Q +E +G PD + ACVGGGSNA+GLFH F+ S Sbjct: 201 TVAGPDPYPRMVRDFNAIVGREARAQMIEDYGRLPDAMTACVGGGSNAIGLFHAFLNDAS 260
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_XYLFM (Tryptophan synthase beta chain OS=Xylella fastidiosa (strain M12) GN=trpB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGP PYP MVRDF+A++G+E R Q +E +G PD + ACVGGGSNA+GLFH F+ S Sbjct: 201 TVAGPDPYPRMVRDFNAIVGREARAQMIEDYGRLPDAMTACVGGGSNAIGLFHAFLNDAS 260
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_XYLFA (Tryptophan synthase beta chain OS=Xylella fastidiosa GN=trpB PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGP PYP MVRDF+A++G+E R Q +E +G PD + ACVGGGSNA+GLFH F+ S Sbjct: 201 TVAGPDPYPRMVRDFNAIVGREARAQMIEDYGRLPDAMTACVGGGSNAIGLFHAFLNDAS 260
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_XYLF2 (Tryptophan synthase beta chain OS=Xylella fastidiosa (strain M23) GN=trpB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 36/60 (60.00%), Postives = 46/60 (76.67%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQDS 193 +VAGP PYP MVRDF+A++G+E R Q +E +G PD + ACVGGGSNA+GLFH F+ S Sbjct: 201 TVAGPDPYPRMVRDFNAIVGREARAQMIEDYGRLPDAMTACVGGGSNAIGLFHAFLNDAS 260
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_XANOM (Tryptophan synthase beta chain OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=trpB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFV 181 +VAGP PYP MVRDF+A++G+E+R Q LE +G PD + ACVGGGSNA+GLFH F+ Sbjct: 201 TVAGPDPYPRMVRDFNAIVGRESRAQMLEDYGRLPDAISACVGGGSNAIGLFHAFL 256
BLAST of EL492435 vs. ExPASy Swiss-Prot
Match: TRPB_RHOBA (Tryptophan synthase beta chain OS=Rhodopirellula baltica GN=trpB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 14 SVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLIACVGGGSNAMGLFHEFVTQD 190 SV GPHP+PMMVRDF +VIG+ETR Q + +G PD ++ACVGGGSNA G+F+ FV + Sbjct: 203 SVIGPHPFPMMVRDFQSVIGRETREQCRDTFGRLPDCVVACVGGGSNAAGMFYPFVEDE 261 The following BLAST results are available for this feature:
BLAST of EL492435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >EL492435 ID=EL492435; Name=EL492435; organism=Citrus sinensis; type=EST; length=194bpback to top |