CX043281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.893e-56 Identity = 109/189 (57.67%), Postives = 131/189 (69.31%), Query Frame = 3 Query: 261 ATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFA-FKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 A +A ++ A G LT+DEIQ TY++VKG+G AN CP ++ G + K G Y+ + FC+EPTSFTVK E K +F TKLMTRLTYTLD + G F+V DG+ + E DGIDYAA TVQL GGERV FLFTIKQ G + G+FLVPSYRGSSFLDPKG+GGSTGYDNA+ALPA Sbjct: 34 AAAAAALATAMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA 222
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.999e-52 Identity = 107/196 (54.59%), Postives = 131/196 (66.84%), Query Frame = 3 Query: 243 IAGFALATSALVVSGASAEGV-PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDS-FAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 +AG A A ++ A A LTYDE+QS +Y+EVK +G A CP + GV S + K GKY+ +CLEP+SF VK K +F+ TKLMTRLTYTLD I V DG+ EKDG+DYAA TVQLAGGERVPFLFTIK L+A G F G+F VPSYRG++FLDPKG+GG++GYD A+ALPA Sbjct: 71 LAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPA 266
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.537e-41 Identity = 87/173 (50.29%), Postives = 121/173 (69.94%), Query Frame = 3 Query: 333 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALP 821 Q+ TY ++ GTG AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+AGGER+P LFT+K LVAS +P +F GEF VPSYR ++FLDPKG+G ++GYD+AIALP Sbjct: 29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP 201
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.537e-41 Identity = 87/173 (50.29%), Postives = 121/173 (69.94%), Query Frame = 3 Query: 333 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALP 821 Q+ TY ++ GTG AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+AGGER+P LFT+K LVAS +P +F GEF VPSYR ++FLDPKG+G ++GYD+AIALP Sbjct: 29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP 201
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 4.620e-41 Identity = 88/173 (50.87%), Postives = 115/173 (66.47%), Query Frame = 3 Query: 342 TYMEVKGTGTANQCP----TIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 TY +++GTG AN+CP T G + + K Y K+ CLEPT+F VK E NK +F KL+TR T T+D++ G + + D ++ FVEKDG+D+ A+TVQL GGERVPFLFTIK LVA +P +F G F VPSYRG++FLDPKG+G +GYDNA+ALPA Sbjct: 34 TYEQIRGTGLANKCPQLTETSRGSIPLDSSK--SYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA 204
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.391e-37 Identity = 85/174 (48.85%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 333 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 Q TY E+ TG AN+CP I S +PG+ Y CLEP + VK E VNK ++ KL+TR T +L++I G V DG + F E+ GID+ VTVQL GGE+VPF FTIK LV +P +F G+F VPSYRG++FLDPKG+G +TGYDNA+ALPA Sbjct: 32 QDLTYDEILNTGLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA 205
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.880e-34 Identity = 77/171 (45.03%), Postives = 102/171 (59.65%), Query Frame = 3 Query: 342 TYMEVKGTGTANQCPTIDGGV-DSFAFKPG-KYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 TY ++ TG AN CP I + +P KY FC+EP + VK E VNK ++ K++TR T +L++I G V DGT+ F EKDGID+ +TV L GGE VPF FT+K + +P +F G+F VPSYRG+ FLDPK +G TGYDNA+ALP+ Sbjct: 35 TYDDIVNTGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPS 205
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.298e-32 Identity = 76/179 (42.46%), Postives = 108/179 (60.34%), Query Frame = 3 Query: 318 TYDEIQSKTYMEVKGTGTANQCPTI-DGGVDSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVAS--------GKPENFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 T ++ + TY ++K TG AN+C ++ + + + GK Y CLEP F VK E NK +F K++TR T +LD++ G + DGT+ F EK GID+ A+TV L GGE VPFLFT+K LVAS + G + VPSYR S+FLDPK +G +TGY++A+A+P+ Sbjct: 26 TAADLGTLTYDQIKDTGLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVAIPS 204
BLAST of CX043281 vs. ExPASy Swiss-Prot
Match: PSBO_POPEU (Oxygen-evolving enhancer protein 1, chloroplastic (Fragments) OS=Populus euphratica GN=PSBO PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17 Identity = 55/116 (47.41%), Postives = 58/116 (50.00%), Query Frame = 3 Query: 477 KAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGKGGSTGYDNAIALPA 824 KAEG+NKN+PPDFQ TKLMTR DGIDYAAVTVQL GGERVPFLFTI KGGSTGYDNA+ALPA Sbjct: 10 KAEGINKNSPPDFQKTKLMTR-------------------------DGIDYAAVTVQLPGGERVPFLFTI-------------------------------KGGSTGYDNAVALPA 69 The following BLAST results are available for this feature:
BLAST of CX043281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043281 ID=CX043281; Name=CX043281; organism=Citrus sinensis; type=EST; length=824bpback to top |