EY665489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 276.559 bits (706), Expect = 1.282e-73 Identity = 151/223 (67.71%), Postives = 172/223 (77.13%), Query Frame = 3 Query: 78 GAATSVPSSSFFGTSLKKVGSRIPPSKVPSAS---FKITA-EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 GA S P++ F G LKK + S++ FK+ A E+DE KQT +DRWKGLAYD SDDQQDIT GKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNTM G YIAPAFMDKLVVHI+KNFM+L NIKVPLILGIWGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA +IIKKGK C L I DL+ GG Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGG 230
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 267.7 bits (683), Expect = 5.957e-71 Identity = 148/227 (65.20%), Postives = 169/227 (74.45%), Query Frame = 3 Query: 78 GAATSVPS-SSFFGTSLKK--VGSRIP---PSKVPSASFKITA--EVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 GA S P+ SSF G L K V + + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDIT GKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN MDG YIA FMDKLVVH++KNFM+L NIKVPLILGIWGG+GQ KSFQC LVFAKMGI PIMM+AG+LES NAG+ PA LIRQ+ REA ++IKKGK L I DL+ GG Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGE-PAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGG 235
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.016e-70 Identity = 144/222 (64.86%), Postives = 165/222 (74.32%), Query Frame = 3 Query: 78 GAATSVPSSSFFGTSLKKV---GSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 GA S P+ F G +K G+++ V + K E+D+ KQT DRWKGLAYD SDDQQDIT GKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNTMDGLYIAPAFMDKL+VH+ KNFM+L NIKVPLILGIWGG+GQ KSFQC LVFAKMGINPIMM+AG+LES N PA LIRQ+ REA +II KGK C L I DL+ GG Sbjct: 10 GAPASTPTI-FLGKKVKNYYHGGNKMKSRVVRVMAAK--KELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNG--EPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGG 226
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.916e-69 Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 3 Query: 78 GAATSVPSSSFFGTSLKK-VGSRIPPSKVPSASFKITAEVDENKQTKK--DRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLECRNLAEGG 734 GA S P++ F G LKK V S + S + + T EN K+ D+WKGLAYD SDDQQDIT GKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNTM G YIAPAFMDKLVVH++KNFM+L NIK+PLILGIWGG+GQ KSFQC LVFAKMGINPIMM+AG+LES NAG+ PA LIRQ+ REA ++IKKGK C L I DL+ GG Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 229
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 6.164e-68 Identity = 135/223 (60.54%), Postives = 162/223 (72.65%), Query Frame = 3 Query: 45 AAAVPLSFNGFGAATSVPSSSFFGTSLKK-VGSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLE 710 A PL+ NG A SVP+S F G+SLKK R P S S + +T + EN++ D+W LA D SDDQ DI GKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++L NIK+PLILG+WGG+GQ KSFQC LVFAK+GINPIMM+AG+LES NAG+ PA LIRQ+ REA ++I KGK C L I DLE Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGE-PAKLIRQRYREAADLIAKGKMCALFINDLE 229
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.693e-47 Identity = 102/195 (52.31%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 135 GSRIPPSKVPSASFKITAEVDENKQTKKDRWKGL--AYDESDDQQDITIGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIKKGKRCRLQITDLE 710 G+R+ V A ++ A + + RW+ + D SDDQQDIT G+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM L IKVPLILGIWGG+GQ K+FQC L + K+GI PI+M+AG+LES NAG+ PA LIR + REA +IIKKG+ C L I DL+ Sbjct: 17 GARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGE-PAKLIRTRYREASDIIKKGRMCSLFINDLD 204
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.135e-24 Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 408 YIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIK-KGKRCRLQITDLE 710 YIAP F+DKL VHITKNF++L ++VPLILGI G +G+ K+FQC L F KMG+ +++ G+LES +AG +PA LIR + RE E+IK +GK C L I DL+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAG-DPARLIRLRYRETAELIKVRGKMCVLMINDLD 104
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.319e-24 Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 408 YIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANLIRQKVREAPEIIK-KGKRCRLQITDLE 710 YIAP F+DKL VHITKNF+++ ++VPLILGI G +G+ K+FQC L F KMGI +++ G+LES +AG +PA LIR + RE E+IK +GK C L I DL+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAG-DPARLIRLRYRETAELIKVRGKMCVLMINDLD 104
BLAST of EY665489 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.757e-22 Identity = 69/134 (51.49%), Postives = 75/134 (55.97%), Query Frame = 3 Query: 231 GLAYDESDDQQDITIGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLLNIKVPLILGIWGGQGQRKSFQCGLVFAKMGINPIMMNAGKLESCNAGKNPANL 632 GLAYD SDDQQDIT +G VDSLFQAPM GTHYAVMSSY+YISQGLR VPLILGIWGG KMGINPIMM+AG+LES NAG+ PA + Sbjct: 1 GLAYDISDDQQDIT--RGMVDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGG--------------KMGINPIMMSAGELESGNAGE-PAKM 81 The following BLAST results are available for this feature:
BLAST of EY665489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665489 ID=EY665489; Name=EY665489; organism=Citrus sinensis; type=EST; length=862bpback to top |