CX043279

Overview
NameCX043279
Unique NameCX043279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACCN (NADPH dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=namA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.013e-14
Identity = 66/198 (33.33%), Postives = 96/198 (48.48%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALG----LYMAESLNKYG----------ILYCHM-VEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRR------FELNAPLNKYNR 732
            +AGFD IELHGAHGYLI++F+    N RTD+YGG+ ENR RF  EI+ AV  E+    + +R+S       + D +PE L     +  A+ + + G          ++  H+ V P  +    K    H+ +    A     L+  G   E   + +    ADL+  GR  L NP  PR       FEL  P ++Y+R
Sbjct:  155 QAGFDVIELHGAHGYLINEFLSPLSNKRTDEYGGTAENRYRFLREIIHAV-KEVWEGPLFVRIS-------ADDYHPEGLTVNDYVQFAKWMKEQGVDLIDCSSGAVVPAHIDVYPGYQVKYAKHLKEHAQI----ATGAVGLITSGVQAE---QILVNSEADLIFVGRELLRNPYFPRTAANELGFELKDP-HQYSR 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACP2 (NADPH dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=namA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14
Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = -3
Query:  241 AIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGL---YMAESLNKYGILYCHMVEPRMKTV-GEKSECPHSLLPMRKAFKGTF-LVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR 738
            A +AGFD IE+HGAHGYLI++F+    N RTD YGGS ENR RF  E+V AV NE+    + +R+S  ++Y   G    + +G+      + ++   +    +V+ R+ T  G +      +        G   L+  G   E+    +   RADL+  GR FL +P  P+
Sbjct:  153 AKKAGFDIIEIHGAHGYLINEFLSPLANHRTDDYGGSPENRYRFLREVVNAV-NEVWDGPLFVRVSA-SDYTTKGLDIADYIGIATWLKEQGVDLIDVSSGAVVQARISTFPGYQVTFAEKIKEGAGIQTGAVGLITSGVQAEE---ILRNQRADLIFIGREFLRDPYFPK 318          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACCR (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=namA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14
Identity = 65/198 (32.83%), Postives = 94/198 (47.47%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY--------------GILYCHM-VEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAPLNKYNR 732
            +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V NE+    + +R+S       + D +P+ L +       K+               ++  H+ V P  +    K    H+ +    A     L+  G   E   + +    ADL+  GR  L NP  PR       FEL  P ++Y R
Sbjct:  155 QAGFDVIELHGAHGYLINEFLSPLTNKRTDKYGGSPENRYRFLREIIDSV-NEVWDGPIFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGIDLIDCSSGAVVPAHIDVYPGYQVQYAKHIKEHTNI----ATGAVGLITTGSQAE---QILNNNEADLIFIGRELLRNPYFPRIAANELGFELQEP-HQYKR 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACC4 (NADPH dehydrogenase OS=Bacillus cereus (strain B4264) GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14
Identity = 63/192 (32.81%), Postives = 90/192 (46.88%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY--------------GILYCHM-VEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V NE+    + +R+S       + D +P+ L +       K+               ++  H+ V P  +    K    H+ +    A     L+  G   E   + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIELHGAHGYLINEFLSPLTNKRTDKYGGSPENRYRFLREIIDSV-NEVWDGPIFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGIDLIDCSSGAVVPAHIDVYPGYQVQYAKHIKEHTKI----ATGAVGLITTGSQAE---QILNNNEADLIFIGRELLRNPYFPRIAANELGFELQEP 331          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACC2 (NADPH dehydrogenase OS=Bacillus cereus (strain G9842) GN=namA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14
Identity = 65/194 (33.51%), Postives = 95/194 (48.97%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTV--GEKSECPHSLLPMRKAFKGTF-LVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAPLNKYNR 732
            +AGFD IELHGAHGYLI++F+    N RTD+YGGS ENR RF  EI+++V N++    + +R+S       + D +P+ L +       K+       ++ C    V P    V  G + +    +    K   G   L+  G   E   + + +  ADL+  GR  L NP  PR       FEL  P ++Y R
Sbjct:  155 QAGFDVIELHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSV-NKVWDGPIFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGIDLIDCSSGAVVPAHIDVYPGYQVQYAKHIKEYTKIATGAVGLITTGSQAE---QILNDNEADLIFIGRELLRNPYFPRIAANELGFELQEP-HQYKR 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_GEOSW (NADPH dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=namA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 63/176 (35.80%), Postives = 88/176 (50.00%), Query Frame = -3
Query:  244 AIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLY----MAESLNKYGI----LYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGT---FLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLP 738
            A EAGFD IE+HGAHGYLI++F+    N R D+YGGS ENR RF  EI++AV  E+    + +R+S       + D +PE L +      A+ + + G+    +    V P    V    + P +    R+A   T    L+  G   E+    +  GRADLV   R  L NP  P
Sbjct:  153 AKEAGFDIIEIHGAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEIIDAV-REVWDGPLFVRIS-------ASDYHPEGLTVKDYVPYAKRMKEQGVDLIDVSSGAVVPAKIRVYPGYQVPFAETIRREANIATGAVGLITSGLQAEE---ILRNGRADLVFLARELLRNPYWP 317          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACCQ (NADPH dehydrogenase OS=Bacillus cereus (strain Q1) GN=namA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.992e-13
Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPRIAANELGFELEEP 331          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACHD (NADPH dehydrogenase OS=Bacillus halodurans GN=namA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13
Identity = 63/182 (34.62%), Postives = 88/182 (48.35%), Query Frame = -3
Query:  229 AIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGI--LYCH--MVEPRMKTVGEKSECPHSLLPMRKAFK--------GTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEL 738
            A +AGFD IE+HGAHGYLI++F+    N RTD YGGSLENR R   EI+  +   +    + +R+S  A Y E G+   + + L  A+ + K GI  + C    V P    V      P   +P+ +A +           L+  G   E+    +   RADL+   R  L NP  PR   L
Sbjct:  152 AKKAGFDIIEIHGAHGYLINEFLSPLTNKRTDAYGGSLENRYRLLREIISEIQT-VWDGPLFVRISA-AEYAEGGNELSDFITL--AKWMKKQGIDLIDCSSGAVVPAPIPV-----YPGYQVPLAEAIRHEANIATGAVGLITSGIQAEE---ILQNERADLIFVARELLRNPYWPREAAL 321          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACCZ (NADPH dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=namA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 61/191 (31.94%), Postives = 90/191 (47.12%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAPLNKYNR 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P ++Y R
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPRIAANELGFELEEP-HQYER 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACC1 (NADPH dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=namA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 59/185 (31.89%), Postives = 86/185 (46.49%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPRIAANELGFELEEP 331          
The following BLAST results are available for this feature:
BLAST of CX043279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
NAMA_BACCN4.013e-1433.33NADPH dehydrogenase OS=Bacillus cereus subsp. cyto... [more]
NAMA_BACP25.242e-1433.92NADPH dehydrogenase OS=Bacillus pumilus (strain SA... [more]
NAMA_BACCR5.242e-1432.83NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]
NAMA_BACC46.846e-1432.81NADPH dehydrogenase OS=Bacillus cereus (strain B42... [more]
NAMA_BACC26.846e-1433.51NADPH dehydrogenase OS=Bacillus cereus (strain G98... [more]
NAMA_GEOSW8.941e-1435.80NADPH dehydrogenase OS=Geobacillus sp. (strain WCH... [more]
NAMA_BACCQ1.992e-1332.43NADPH dehydrogenase OS=Bacillus cereus (strain Q1)... [more]
NAMA_BACHD3.397e-1334.62NADPH dehydrogenase OS=Bacillus halodurans GN=namA... [more]
NAMA_BACCZ4.437e-1331.94NADPH dehydrogenase OS=Bacillus cereus (strain ZK ... [more]
NAMA_BACC14.437e-1331.89NADPH dehydrogenase OS=Bacillus cereus (strain ATC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A08-B16-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043279 ID=CX043279; Name=CX043279; organism=Citrus sinensis; type=EST; length=740bp
CTTACGCCAATACAATTTTATTGAGATAACCTATATTGGCTTTTACATAA
ACACAGTACATCTATAAACAATCAGAAAACAGGATTAAATCCGAGATAAT
GCTTTATCAGTCTAATCATTTTTCTTGGTAACCAAAGAAGAGGTGTTGAG
AAATGGATAATCTGTGTAACCAACAACAGGATCGGATGTGTAGAATGTTT
CTCTGTTGTACTTATTGAGCGGAGCATTGAGCTCAAATCTCCTGGGTAAA
TCTGGATTAGCCAAGAACAAGCGACCATAAACAACAAGATCTGCACGGCC
TTCAGCAATAGCTTTGTTTCCATCTTCCCTGTCATAACCCCCAGCGACAA
GAAAAGTACCCTTGAAAGCCTTTCTCATGGGCAGCAAACTGTGAGGACAT
TCAGATTTTTCTCCAACTGTTTTCATCCTTGGCTCAACCATGTGACAATA
GAGGATACCATATTTGTTCAAGGATTCTGCCATGTAAAGACCTAAAGCTT
CTGGGTTAGAGTCTCCTGATTCCATATAGTTTGCAAACGGAGATAGTCTT
ATCCCAACCCTATCTGCCCCTATTTCATTGGAAACAGCTTCAACTATTTC
TAAAGCAAAACGGCAACGATTCTCTAAGGATCCTCCATACTGGTCTGTTC
GATCATTCACTTGATCCTTCATAAATTGGTCAATTAGGTAGCCATGTGCA
CCGTGGAGCTCAATGCCATCAAAACCAGCCTCAATTGCGT
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