CX043279

Overview
NameCX043279
Unique NameCX043279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACC0 (NADPH dehydrogenase OS=Bacillus cereus (strain AH820) GN=namA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 59/185 (31.89%), Postives = 86/185 (46.49%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIAANELGFELEEP 331          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACAN (NADPH dehydrogenase OS=Bacillus anthracis GN=namA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 61/191 (31.94%), Postives = 90/191 (47.12%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAPLNKYNR 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P ++Y R
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPRIAANELGFELEEP-HQYER 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACAC (NADPH dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=namA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 61/191 (31.94%), Postives = 90/191 (47.12%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAPLNKYNR 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P ++Y R
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPRIAANELGFELEEP-HQYER 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACAA (NADPH dehydrogenase OS=Bacillus anthracis (strain A0248) GN=namA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.437e-13
Identity = 61/191 (31.94%), Postives = 90/191 (47.12%), Query Frame = -3
Query:  202 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAPLNKYNR 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P ++Y R
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILNNNEADLIFIGRELLRNPYFPRIAANELGFELEEP-HQYER 336          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = -3
Query:  493 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS ENR RF  EI+E++ NE+    + +R+S       + D +P+ L
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGL 226          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: FADH_ECOLI (2,4-dienoyl-CoA reductase [NADPH] OS=Escherichia coli (strain K12) GN=fadH PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -3
Query:  247 AIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCH----MVEPRMKTVGEKSECPHSLLP-MRKAFKGTF---LVAGG--YDREDGNKAIAEGRADLVVYGRLFLANPDL 738
            A EAG+DG+E+ G+ GYLI++F+  + N R+DQ+GG   NR RFA+E+V AV   +G D + I      + +E G +  E + L  A+++   G    +      E R+ T+   +  P      + +  KG     LV      D +  +  ++ G AD+V   R FLA+ +L
Sbjct:  151 AREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVEL--AQAIEAAGATIINTGIGWHEARIPTIA--TPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAEL 320          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACC3 (NADPH dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=namA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 58/185 (31.35%), Postives = 85/185 (45.95%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS E R RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPEKRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIAANELGFELEEP 331          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACAH (NADPH dehydrogenase OS=Bacillus thuringiensis (strain Al Hakam) GN=namA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 58/185 (31.35%), Postives = 85/185 (45.95%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS E R RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPEKRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYVQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIAANELGFELEEP 331          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_BACHK (NADPH dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=namA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 58/185 (31.35%), Postives = 85/185 (45.95%), Query Frame = -3
Query:  220 EAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCH--MVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPR------RFELNAP 732
            +AGFD IE+HGAHGYLI++F+    N RTD+YGGS E R RF  EI++++ NE+    + +R+S       + D +P+ L +       K+       ++ C    V P    V    +  ++      A   T  V          + +    ADL+  GR  L NP  PR       FEL  P
Sbjct:  155 QAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPEKRYRFLREIIDSI-NEVWNGPLFVRIS-------ANDYHPDGLTVQDYIQYTKWMKEQGVDLIDCSSGAVVPARIDVYPGYQVQYAKHIKEHANIATGAVGLITTGAQAEQILTNNEADLIFIGRELLRNPYFPRIAANELGFELEEP 331          
BLAST of CX043279 vs. ExPASy Swiss-Prot
Match: NAMA_GEOTN (NADPH dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=namA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = -3
Query:  244 AIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLY----MAESLNKYGI----LYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGT---FLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLP 738
            A +AGFD IE+H AHGYLI++F+    N R D+YGGS ENR  F  E+++AV  E+    + +R+S       + D +P+ L +       + + + G+    +    V P    V    + P +    R+A   T    L+  G+  E+    +  GRADLV  GR  L NP  P
Sbjct:  153 AKKAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYHFLGEVIDAV-REVWDGPLFVRIS-------ASDYHPDGLTVKDYVPYVKRMKEQGVDLVDVSSGAVVPARIDVYPGYQVPFAEFIRREAGIPTGAVGLITSGWQAEE---VLHNGRADLVFLGRELLRNPYWP 317          
The following BLAST results are available for this feature:
BLAST of CX043279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
NAMA_BACC04.437e-1331.89NADPH dehydrogenase OS=Bacillus cereus (strain AH8... [more]
NAMA_BACAN4.437e-1331.94NADPH dehydrogenase OS=Bacillus anthracis GN=namA ... [more]
NAMA_BACAC4.437e-1331.94NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]
NAMA_BACAA4.437e-1331.94NADPH dehydrogenase OS=Bacillus anthracis (strain ... [more]
NAMA_BACC77.569e-1347.50NADPH dehydrogenase OS=Bacillus cereus (strain AH1... [more]
FADH_ECOLI1.686e-1231.612,4-dienoyl-CoA reductase [NADPH] OS=Escherichia c... [more]
NAMA_BACC32.202e-1231.35NADPH dehydrogenase OS=Bacillus cereus (strain 03B... [more]
NAMA_BACAH2.202e-1231.35NADPH dehydrogenase OS=Bacillus thuringiensis (str... [more]
NAMA_BACHK2.876e-1231.35NADPH dehydrogenase OS=Bacillus thuringiensis subs... [more]
NAMA_GEOTN3.756e-1232.95NADPH dehydrogenase OS=Geobacillus thermodenitrifi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A08-B16-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043279 ID=CX043279; Name=CX043279; organism=Citrus sinensis; type=EST; length=740bp
CTTACGCCAATACAATTTTATTGAGATAACCTATATTGGCTTTTACATAA
ACACAGTACATCTATAAACAATCAGAAAACAGGATTAAATCCGAGATAAT
GCTTTATCAGTCTAATCATTTTTCTTGGTAACCAAAGAAGAGGTGTTGAG
AAATGGATAATCTGTGTAACCAACAACAGGATCGGATGTGTAGAATGTTT
CTCTGTTGTACTTATTGAGCGGAGCATTGAGCTCAAATCTCCTGGGTAAA
TCTGGATTAGCCAAGAACAAGCGACCATAAACAACAAGATCTGCACGGCC
TTCAGCAATAGCTTTGTTTCCATCTTCCCTGTCATAACCCCCAGCGACAA
GAAAAGTACCCTTGAAAGCCTTTCTCATGGGCAGCAAACTGTGAGGACAT
TCAGATTTTTCTCCAACTGTTTTCATCCTTGGCTCAACCATGTGACAATA
GAGGATACCATATTTGTTCAAGGATTCTGCCATGTAAAGACCTAAAGCTT
CTGGGTTAGAGTCTCCTGATTCCATATAGTTTGCAAACGGAGATAGTCTT
ATCCCAACCCTATCTGCCCCTATTTCATTGGAAACAGCTTCAACTATTTC
TAAAGCAAAACGGCAACGATTCTCTAAGGATCCTCCATACTGGTCTGTTC
GATCATTCACTTGATCCTTCATAAATTGGTCAATTAGGTAGCCATGTGCA
CCGTGGAGCTCAATGCCATCAAAACCAGCCTCAATTGCGT
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