CX043278

Overview
NameCX043278
Unique NameCX043278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1271 contig Csv1_Contig1271:145..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.201e-39
Identity = 95/242 (39.26%), Postives = 142/242 (58.68%), Query Frame = 1
Query:    1 SHRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQP-NGQAPISSTDKPL---TPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME-SGDSNPEALGLY 699
            +HR V+ PLTR R+ +  N+P    A +YY QR  + G ++I E T +S  A GY + PGIW+ EQV  WK I  A+H      + Q+W +G  S  D    +G     ++D+     T Q +A   +  + +    L  D+I Q + D+  AA+N+I AG DG+E+H A+GYL++QF+    N RTD+YGG++ENR RF LE+V+A+   IG +RVG+RLSP+  +   SG + P  +  Y
Sbjct:   29 AHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFISPQAGGYDNAPGIWSDEQVAEWKNIFLAIHDCQSFAWVQLWSLGWASFPDVLARDGLRYDCASDRVYMNATLQEKAKDANNLEHS----LTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNKRTDEYGGTIENRARFTLEVVDALIETIGPERVGLRLSPYGTFNSMSGGAEPGIIAQY 266          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: OYE2_YEAST (NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae GN=OYE2 PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.569e-39
Identity = 89/228 (39.04%), Postives = 131/228 (57.46%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYN--NVP-QPHAILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFA--NYMESG 669
            HR V+ PLTR R+ +  N+P +  A+ YY+QR  + G L+I E T  S  + GY + PGIW++EQ++ W  I  A+H      + Q+W +G  +  D          S    +               P   +  DEI Q V ++  AA+N+I AG DG+E+H A+GYL++QF+    N+RTD+YGGS+ENR RF LE+V+AV + IG ++VG+RLSP+   N M  G
Sbjct:   30 HRAVIPPLTRMRAQHPGNIPNRDWAVEYYAQRAQRPGTLIITEGTFPSPQSGGYDNAPGIWSEEQIKEWTKIFKAIHENKSFAWVQLWVLGWAAFPDTLARDGLRYDSASDNVYMNAEQEEKAKKANNPQHSITKDEIKQYVKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNNRTDEYGGSIENRARFTLEVVDAVVDAIGPEKVGLRLSPYGVFNSMSGG 257          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: KYE1_KLULA (Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.266e-38
Identity = 91/232 (39.22%), Postives = 136/232 (58.62%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQD-YQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY-MESGDSNP 681
            HRVV+  LTR R+ +  NVP P  A+ YY QR+   G ++I E    S  + GY + PG+W++EQ+  W+ I  A+H      + Q+W +GR +  D    +G    S++D+    +       I    P   +  DEI Q + D+  AA+  I+AG DG+E+H A+GYL++QF+    N RTD+YGGS+ENR RF LE+V+AV + +GA+R  IR SP+  +   SG S+P
Sbjct:   29 HRVVMPALTRMRALHPGNVPNPDWAVEYYRQRSQYPGTMIITEGAFPSAQSGGYDNAPGVWSEEQLAQWRKIFKAIHDNKSFVWVQLWVLGRQAFADNLARDGLRYDSASDEVYMGEDEKERA-IRSNNPQHGITKDEIKQYIRDYVDAAKKCIDAGADGVEIHSANGYLLNQFLDPISNKRTDEYGGSIENRARFVLEVVDAVVDAVGAERTSIRFSPYGVFGTMSGGSDP 259          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: OYEA_SCHPO (Putative NADPH dehydrogenase C5H10.04 OS=Schizosaccharomyces pombe GN=SPAC5H10.04 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.339e-33
Identity = 87/236 (36.86%), Postives = 136/236 (57.63%), Query Frame = 1
Query:    4 HRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQA--PISSTDKPLTPQIRANGVDI------AQFTPPRRLRTDEIPQIVNDFRLAARNAIE-AGFDGIELHGAHGYLIDQFMKDQVNDRTD-QYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGD 672
            HR+V AP+TR R+  Y  +     + YYSQR+   G LLIA+AT V + + G+P+ P  +TKEQ E+W P+V+AVH      F Q W +      +Y+ + +    I+ +D P  P     G+         +    + +   +I + + DF  AA  A+  A  DG+E+H  +G+L+D+F+     D+ D +Y GS+ENRCRF LE++EAV+ +IG +RVG R+SPF+ +M+  D
Sbjct:   20 HRIVHAPMTRLRATDYGKITGL-MVEYYSQRSMIPGTLLIADATFVGEKSGGFPNNPRCFTKEQAESWIPLVEAVHKNKSFLFIQFWPLPGDLKDEYRNDLEKMQKITYSDCPQDPGGLPAGIHSFDAVQGVEVYKKKYMSKRDIQEHIQDFVNAADLAVNIAKADGVEIHQVNGFLLDRFVLGGFGDQCDPEYRGSIENRCRFPLEVLEAVTRKIGQERVGYRISPFSGWMQKID 254          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: EBP1_CANAL (Probable NADPH dehydrogenase OS=Candida albicans GN=EBP1 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.339e-33
Identity = 88/247 (35.63%), Postives = 143/247 (57.89%), Query Frame = 1
Query:    7 RVVLAPLTRQR-SYNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN-QDYQPNGQAPISST----DKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVN-DFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYG-GSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNK 720
            R+   P TR R S +++P    + YY+ R+   G L+I EAT  S+        PGI+   Q ++WK I +A+H  G     Q+W++GRV+N +D + +G   I+ +    D+      +  G ++      R L  +EI  IV  ++  AA++A+EAGFD +E+HGAHGYL+DQF+    N RTD+YG GS+ENR R  L +V+ +   +GA+R+ +RLSP+A++ +  +   E +  Y+ + L +
Sbjct:   42 RIAYVPTTRFRASKDHIPSDLQLNYYNARSQYPGTLIITEATFASERGGIDLHVPGIYNDAQAKSWKKINEAIHGNGSFSSVQLWYLGRVANAKDLKDSGLPLIAPSAVYWDENSEKLAKEAGNEL------RALTEEEIDHIVEVEYPNAAKHALEAGFDYVEIHGAHGYLLDQFLNLASNKRTDKYGCGSIENRARLLLRVVDKLIEVVGANRLALRLSPWASF-QGMEIEGEEIHSYILQQLQQ 281          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: OYEB_SCHPO (Putative NADPH dehydrogenase C5H10.10 OS=Schizosaccharomyces pombe GN=SPAC5H10.10 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28
Identity = 82/238 (34.45%), Postives = 126/238 (52.94%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYNN--VPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPN---------GQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAI-EAGFDGIELHGAHGYLIDQFMKDQVNDRTD-QYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS 675
            HR+V AP TR R  +N  V       YY QR++  G LLI E+      + G+ + P ++  E VEAWKPIV A+H      F Q W++      DY  +         G+ P+  T  P      A  +   +    + +   +I + +  +  AA+ A+   G DG+E+H  +G+L+D+F+ +   D+ D +Y GSLENR RF LE++E+V N IG +RVG R+SPF++  +  DS
Sbjct:   26 HRMVHAPATRLRCLDNGLVMTDLVKEYYKQRSSIPGTLLITESLFSGAKSGGFSNIPCLYNDEHVEAWKPIVQAIHDNDCFVFIQFWNLPGELKVDYLEDQERLEKVTQGECPMDPTGLPAALG-SAYSICGEELYVDKFMTKQDIQEHITTYTEAAKRAVFGCGADGVEVHQVNGFLLDKFVLNGYGDKCDPEYCGSLENRARFCLELLESVVNAIGQERVGYRISPFSDIWKDKDS 262          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: YQIG_BACSU (Probable NADH-dependent flavin oxidoreductase yqiG OS=Bacillus subtilis GN=yqiG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.873e-25
Identity = 84/243 (34.57%), Postives = 115/243 (47.33%), Query Frame = 1
Query:    1 SHRVVLAPLTRQRSYNNVPQPHAIL-YYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI-----GADRVGIRLSPFANYMESGDSNPEALGLYMAES 711
            ++R+ +AP+T   S  +     A L Y   R+ + G++I     V+   + +P  P I     +   K +  A+ A+G     QI H G     +  P  Q  +  +D      +  NG  IA     R L  +E+  IV  F  A R AIEAGFDG+E+HGA+GYLI QF   + N RTD++GGS E R  F L IV+ V         GA  VG RLSP           PE  GL M E+
Sbjct:   21 NNRIAVAPMTHYASNEDGTISEAELDYIIPRSKEMGMVITACANVTPDGKAFPGQPAIHDDSNIPGLKKLAQAIQAQGAKAVVQIHHGGIECPSELVPQ-QDVVGPSD------VFDNGKQIA-----RALTEEEVENIVKAFGEATRRAIEAGFDGVEIHGANGYLIQQFYSPKTNQRTDRWGGSDEKRLAFPLAIVDEVKKAASEHAKGAFLVGYRLSP---------EEPETPGLTMTET 242          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACA2 (NADPH dehydrogenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=namA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24
Identity = 74/225 (32.89%), Postives = 117/225 (52.00%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSY--NNVPQP-HAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESG 669
            +R+V+AP+    S+  +   QP H   Y S+   + GL+I EAT V+   +      GIW+ + +E +  + + V A+G     Q+ H GR +  +      + I   ++  TP                 + T++I + + +F+ AA  A EAGFD IELH AHGYL+ +F+    N RTD+YGGS ENR RF  E +EAV  E+    + +R+S  ++Y + G
Sbjct:   18 NRIVMAPMCMYSSHEKDGKLQPFHMAHYISRAIGQVGLIIVEATAVNPQGRISDQDLGIWSDDHIEGFAKLTEQVKAQGSKIGIQLAHAGRKAELEGDIYAPSAIPFDEQSKTPA---------------EMTTEQIKETIQEFKQAAARAKEAGFDIIELHAAHGYLMHEFLSPLSNHRTDEYGGSHENRYRFLGETIEAV-KEVWDGPLFVRISA-SDYTDKG 225          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACHD (NADPH dehydrogenase OS=Bacillus halodurans GN=namA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24
Identity = 76/244 (31.15%), Postives = 120/244 (49.18%), Query Frame = 1
Query:    4 HRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYG 726
            +R+V++P+    S   +   +P  I +Y  R   + GL+I EAT V+   +  P   GIW+ + +      V+ +HA G     Q+ H GR +  D                 P I  + +   +   P  +  ++I + +  F+L A  A +AGFD IE+HGAHGYLI++F+    N RTD YGGSLENR R   EI+  +   +    + +R+S  A Y E G+   + + L  A+ + K G
Sbjct:   18 NRIVMSPMCMYSSDQKDGKIRPFHISHYESRAAGQVGLIIVEATAVTPQGRISPYDLGIWSDDHISGLTETVERIHAHGAKAAIQLAHAGRKAELD----------------GPIIAPSAISYDKMKTPDAMTEEQISETIEAFKLGALRAKKAGFDIIEIHGAHGYLINEFLSPLTNKRTDAYGGSLENRYRLLREIISEIQT-VWDGPLFVRISA-AEYAEGGNELSDFITL--AKWMKKQG 241          
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_CLOAB (NADPH dehydrogenase OS=Clostridium acetobutylicum GN=namA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24
Identity = 68/201 (33.83%), Postives = 103/201 (51.24%), Query Frame = 1
Query:    4 HRVVLAPLTRQRSYN--NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 600
            +R+V+ P+    S N  N+   H + Y ++     G +I EATG++   +      GIW+++  E    +V  V   G     Q+ H GR     Y+     P++ +        +           P+ L  +EI +I+  F+ AA+ A +AGFD IE+HGAHGYLI+QF+    N R D+YGGS ENR RF  E++EAV
Sbjct:   16 NRIVMPPMCMYSSDNTGNINDFHLVHYTTRSIGGVGFIIVEATGITPNGRISDKDLGIWSEKHAEGLSFLVKEVKKYGSKIAIQLNHSGR----KYEGTSGEPVAPSALAFDENSKT----------PKELTKNEIKEIILAFKAAAKRAEKAGFDAIEIHGAHGYLINQFLSPLSNFRDDEYGGSTENRTRFLKEVLEAV 202          
The following BLAST results are available for this feature:
BLAST of CX043278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
OYE3_YEAST1.201e-3939.26NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]
OYE2_YEAST1.569e-3939.04NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae ... [more]
KYE1_KLULA2.266e-3839.22Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1... [more]
OYEA_SCHPO8.339e-3336.86Putative NADPH dehydrogenase C5H10.04 OS=Schizosac... [more]
EBP1_CANAL8.339e-3335.63Probable NADPH dehydrogenase OS=Candida albicans G... [more]
OYEB_SCHPO1.627e-2834.45Putative NADPH dehydrogenase C5H10.10 OS=Schizosac... [more]
YQIG_BACSU2.873e-2534.57Probable NADH-dependent flavin oxidoreductase yqiG... [more]
NAMA_BACA22.432e-2432.89NADPH dehydrogenase OS=Bacillus amyloliquefaciens ... [more]
NAMA_BACHD4.148e-2431.15NADPH dehydrogenase OS=Bacillus halodurans GN=namA... [more]
NAMA_CLOAB5.418e-2433.83NADPH dehydrogenase OS=Clostridium acetobutylicum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A08-B16-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043278 ID=CX043278; Name=CX043278; organism=Citrus sinensis; type=EST; length=728bp
TCTCATAGAGTTGTTTTGGCACCACTGACTAGACAGAGATCATACAACAA
TGTTCCTCAGCCACATGCCATTTTGTATTACTCTCAAAGAACCACCAAAG
GGGGTTTGCTTATAGCCGAAGCCACTGGAGTTTCCGACACTGCTCAAGGG
TATCCAGATACACCTGGTATCTGGACAAAGGAGCAAGTTGAAGCATGGAA
ACCGATTGTAGATGCTGTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGA
TTTGGCACGTTGGCAGGGTTTCAAATCAAGATTATCAGCCAAATGGTCAA
GCTCCAATTTCCAGTACAGACAAGCCATTGACCCCTCAAATCCGCGCTAA
TGGTGTTGATATTGCACAATTCACTCCTCCAAGGCGGCTAAGGACAGATG
AAATCCCTCAAATTGTGAATGATTTCAGGCTTGCTGCAAGAAACGCAATT
GAGGCTGGTTTTGATGGCATTGAGCTCCACGGTGCACATGGCTACCTAAT
TGACCAATTTATGAAGGATCAAGTGAATGATCGAACAGACCAGTATGGAG
GATCCTTAGAGAATCGTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTT
TCCAATGAAATAGGGGCAGATAGGGTTGGGATAAGACTATCTCCGTTTGC
AAACTATATGGAATCAGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACA
TGGCAGAATCCTTGAACAAATATGGTAT
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