CX043278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_LISMC (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=namA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21 Identity = 72/219 (32.88%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642 +R+V++P+ N H Y S+ GL+I EAT V + + G+W EQV A K +VD +H G Q+ H GR + + P+ A +DKP+ L + I ++V DF+ AA A EAGFD IE+H AHGYLI QF+ N R D YGG NR + +I++AV E+ + +R+S Sbjct: 17 NRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAV-KEVWDGPIIVRVS 216
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_LISW6 (NADPH dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=namA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21 Identity = 70/216 (32.41%), Postives = 103/216 (47.69%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642 +R+V++P+ N H Y S+ GL+I EAT V + + G+W EQV A K +VD +H+ G Q+ H GR + + + I+ +K P L + I ++V DF+ AA A EAGFD IE+H AHGYLI QF+ N R D YGG NR + +I++AV E+ + +R+S Sbjct: 17 NRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKHLVDGLHSHGAKAGIQLAHAGRKAVLPGEIVAPSAIAYDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAV-KEVWDGPIIVRVS 216
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_GEOKA (NADPH dehydrogenase OS=Geobacillus kaustophilus GN=namA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21 Identity = 67/209 (32.06%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 64 HAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690 H I Y ++ + GL+I EATGV+ + GIW+ + + + +V V G Q+ H GR S + + + D TP + + +I + V F+ AR A EAGFD IE+H AHGYLI++F+ N R D+YGGS ENR RF E+++AV E+ + +R+S + D +P+ L Sbjct: 41 HKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTP---------------KEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAV-REVWDGPLFVRIS-------ASDYHPDGL 226
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: OYEC_SCHPO (Putative NADPH dehydrogenase C23G7.10c OS=Schizosaccharomyces pombe GN=SPBC23G7.10c PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 1 Query: 103 GLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDI--AQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI 612 GL++ EAT VS + P+ G+W + Q++ + IV+ H++ Q+ H GR ++ G + + D P +L + ++V+ F +AA+ A+E GFD IE+HGAHGYLI + NDR D+YGG+ E R F +E+V +V I Sbjct: 81 GLVMVEATAVSPEGRISPNDSGLWMESQMKPLRRIVEFAHSQNQKIGIQLAHAGRKASTTAPYRGYTVATEAQGGWENDVYGPNEDRWDENHAQPHKLTEKQYDELVDKFVVAAKRAVEIGFDVIEIHGAHGYLISSTVSPATNDRNDKYGGTFEKRILFPMEVVHSVRKAI 252
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACC2 (NADPH dehydrogenase OS=Bacillus cereus (strain G9842) GN=namA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 73/235 (31.06%), Postives = 112/235 (47.66%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690 +R+V++P+ S N V H I Y ++ + GL++ EAT V + GIW +E +H G Q+ H GR + + P+ P S T K P + +I + + F+ AA + +AGFD IELHGAHGYLI++F+ N RTD+YGGS ENR RF EI+++V N++ + +R+S + D +P+ L Sbjct: 18 NRIVMSPMCMYSSGNEDGRVTNFHLIHYGTRAAGQVGLVMVEATAVLAEGRISNKDLGIWDDNLIEGLHKTTTFIHDNGAKAAIQLAHAGRKAELGTNAFAPSA-IPFSDTMKI-----------------PVEMNIQQIKETILAFQRAALRSKQAGFDVIELHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIDSV-NKVWDGPIFVRIS-------ANDYHPDGL 226
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_LISMO (NADPH dehydrogenase OS=Listeria monocytogenes GN=namA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.631e-20 Identity = 71/219 (32.42%), Postives = 103/219 (47.03%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGR---VSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642 +R+V++P+ N H Y S+ GL+I EAT V + + G+W EQV A K +V +H G Q+ H GR + + P+ A +DKP+ L + I ++V DF+ AA A EAGFD IE+H AHGYLI QF+ N R D YGG NR + +I++AV E+ + +R+S Sbjct: 17 NRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVGGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAV-KEVWDGPIIVRVS 216
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_LISMH (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=namA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642 +R+V++P+ N H Y S+ GL+I EAT V + + G+W EQV A K +VD +H G Q+ H GR + + + I +K P L + I ++V DF+ AA A EAGFD IE+H AHGYLI QF+ N R D YGG NR + +I++AV E+ + +R+S Sbjct: 17 NRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKRLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIPFDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAV-KEVWDGPIIVRVS 216
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACCQ (NADPH dehydrogenase OS=Bacillus cereus (strain Q1) GN=namA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.634e-20 Identity = 72/234 (30.77%), Postives = 109/234 (46.58%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690 +R+V++P+ S N + H I Y ++ + GL++ EAT V + GIW +E +H G Q+ H GR + D P + T K P + +I V F+ AA + +AGFD IE+HGAHGYLI++F+ N RTD+YGGS ENR RF EI+E++ NE+ + +R+S + D +P+ L Sbjct: 18 NRIVMSPMCMYSSKNEDGQITNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKATTFIHDNGAKAAIQLAHAGRKAELETDALAPSAIPFNETMKM-----------------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGL 226
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_BACC7 (NADPH dehydrogenase OS=Bacillus cereus (strain AH187) GN=namA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.634e-20 Identity = 72/234 (30.77%), Postives = 109/234 (46.58%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSN--QDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEAL 690 +R+V++P+ S N + H I Y ++ + GL++ EAT V + GIW +E +H G Q+ H GR + D P + T K P + +I V F+ AA + +AGFD IE+HGAHGYLI++F+ N RTD+YGGS ENR RF EI+E++ NE+ + +R+S + D +P+ L Sbjct: 18 NRIVMSPMCMYSSKNEDGQITNFHLIHYGTRAAGQVGLVMIEATAVLPEGRISNKDLGIWDDSLIEGLHKATTFIHDNGAKAAIQLAHAGRKAELETDALAPSAIPFNETMKM-----------------PIEMSKHQIKDTVLAFQQAAVRSKQAGFDVIEIHGAHGYLINEFLSPLTNKRTDEYGGSPENRYRFLREIIESI-NEVWNGPLFVRIS-------ANDYHPDGL 226
BLAST of CX043278 vs. ExPASy Swiss-Prot
Match: NAMA_LISIN (NADPH dehydrogenase OS=Listeria innocua GN=namA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.746e-20 Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 4 HRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNQDYQPNGQAPISSTDKPLTPQIRANGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLS 642 +R+V++P+ N H Y S+ GL+I EAT V + + G+W EQV A K +VD +H G Q+ H GR + + + I +K P L + I ++V DF+ AA A EAGFD IE+H AHGYLI QF+ N R D YGG NR + +I++AV E+ + +R+S Sbjct: 17 NRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKRLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIPFDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPISNRREDNYGGPAGNRYKILSDIIKAV-KEVWDGPIIVRVS 216 The following BLAST results are available for this feature:
BLAST of CX043278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043278 ID=CX043278; Name=CX043278; organism=Citrus sinensis; type=EST; length=728bpback to top |