CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_CLOK1 (Tryptophan synthase beta chain OS=Clostridium kluyveri (strain NBRC 12016) GN=trpB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.693e-38 Identity = 79/154 (51.30%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 334 NPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 N G+FGRFGG++VPET++T L LE FN +D+KF +E L++Y GR TPLY+AE LT + G +IYLKREDLNH GAHKINN +GQ ++AKRMG+K ++A TGAGQHGV ++MG D +QS VL MK+L Sbjct: 7 NSGRFGRFGGQYVPETVMTALMELEESFNKAKEDSKFIDEYMYYLQEYSGRPTPLYYAENLTKNLG-----GAKIYLKREDLNHTGAHKINNVLGQILLAKRMGKKKVIAETGAGQHGVAVATGAAMFQMECVIYMGEEDCRRQSLNVLRMKIL 155
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_STRT1 (Tryptophan synthase beta chain OS=Streptococcus thermophilus (strain CNRZ 1066) GN=trpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.005e-37 Identity = 78/152 (51.32%), Postives = 104/152 (68.42%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G+FGG+FVPETL+T + L+ + +D+ FQ EL L++YVGRETPLY A+RLTD+ G +IYLKREDLNH GAHKINNA+GQ ++AKRMG+K I+A TGAGQHGV ++MG D+++Q+ V M+LL Sbjct: 10 GFYGKFGGQFVPETLMTAVIELDKAYREAKEDSSFQAELDDLLKNYVGRETPLYHAKRLTDYIG-----GAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKKKIIAETGAGQHGVATATAAALFDMDCTIYMGEEDVKRQALNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_LACLS (Tryptophan synthase beta chain OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=trpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.005e-37 Identity = 78/154 (50.65%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 334 NPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 N G +G+FGG+FVPETL+T + LE + +D FQ EL L+DYVGRE PLYFA+RLT++ G +IYLKREDLNH GAHKINNA+GQ ++AK+MG+ ++A TGAGQHGV ++MG D+++QS V M+LL Sbjct: 8 NQGFYGQFGGQFVPETLMTAVKELEVAYEDSKKDPVFQAELKELLKDYVGRENPLYFAKRLTEY-----AGGAKIYLKREDLNHTGAHKINNALGQVLLAKKMGKNKVIAETGAGQHGVATATAAALFGMECTIYMGEEDVKRQSLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_LACLM (Tryptophan synthase beta chain OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=trpB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.005e-37 Identity = 78/154 (50.65%), Postives = 103/154 (66.88%), Query Frame = 1 Query: 334 NPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 N G +G+FGG+FVPETL+T + LE + +D FQ EL L+DYVGRE PLYFA+RLT++ G +IYLKREDLNH GAHKINNA+GQ ++AK+MG+ ++A TGAGQHGV ++MG D+++QS V M+LL Sbjct: 8 NQGFYGQFGGQFVPETLMTAVKELEVAYEDSKKDPVFQAELKELLKDYVGRENPLYFAKRLTEY-----AGGAKIYLKREDLNHTGAHKINNALGQVLLAKKMGKNKVIAETGAGQHGVATATAAALFGMECTIYMGEEDVKRQSLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PROM2 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9215) GN=trpB PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.312e-37 Identity = 79/152 (51.97%), Postives = 107/152 (70.39%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FG++GG++VPETL+ L LE + +D F +EL+ L+ YVGRETPLY A+RLT++Y+ +K P+I+LKREDLNH GAHKINNA+GQA++A RMG+K I+A TGAGQHGV ++MG D+++QS V MKLL Sbjct: 24 GRFGKYGGQYVPETLMPALFELETAASNAWKDKLFVKELNHLLKTYVGRETPLYEAKRLTEYYKTKKAI-PKIWLKREDLNHTGAHKINNALGQALLAIRMGKKRIIAETGAGQHGVATATVCARFGLKCIIYMGAEDIKRQSLNVFRMKLL 174
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_OCEIH (Tryptophan synthase beta chain OS=Oceanobacillus iheyensis GN=trpB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.714e-37 Identity = 79/152 (51.97%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 GK+G FGG+FVPE L+ + LE + L+D F EEL T L +Y+GRETPLY A++LT+H G +IYLKREDLNH GAHKINN IGQA++ RMG+K +VA TGAGQHGV VFMG D+++Q V M+LL Sbjct: 11 GKYGEFGGRFVPELLMPAVLELEKAYEDALKDESFNEELQTYLTEYIGRETPLYHAKKLTEH-----AGGAQIYLKREDLNHTGAHKINNTIGQALLTLRMGKKKVVAETGAGQHGVATATVCSLLGLECIVFMGEEDIKRQKLNVFRMELL 157
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_STRZJ (Tryptophan synthase beta chain OS=Streptococcus pneumoniae (strain JJA) GN=trpB PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.238e-37 Identity = 80/152 (52.63%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G+FGG+FVPETL+T + LE + D FQEEL+ LR YVGRETPLY+A+ LT H G +IYLKREDLNH GAHKINNA+GQ +AKRMG+K I+A TGAGQHGV + MG D+++Q+ V M+LL Sbjct: 10 GFYGKFGGRFVPETLMTAVLELEKAYRESQADPSFQEELNQLLRQYVGRETPLYYAKNLTQHIG-----GAKIYLKREDLNHTGAHKINNALGQVWLAKRMGKKKIIAETGAGQHGVATATAAALFNMECTIHMGEEDVKRQALNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_THETN (Tryptophan synthase beta chain OS=Thermoanaerobacter tengcongensis GN=trpB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.818e-37 Identity = 79/152 (51.97%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGG++VPET++ L LE EF +D KF EE L++Y GR TPLY+AE LT ++ G +IYLKREDLNH GAHKINN +GQ ++AKRMG+K I+A TGAGQHGV +FMG D+++Q+ V MKLL Sbjct: 3 GRFGRFGGQYVPETVMNALIELEREFEEAKKDEKFMEEYRYYLKEYSGRPTPLYYAENLT-----KRLGGAKIYLKREDLNHTGAHKINNVLGQVLLAKRMGKKRIIAETGAGQHGVATATAAAMFGMECEIFMGEEDIKRQALNVFRMKLL 149
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_THEPX (Tryptophan synthase beta chain OS=Thermoanaerobacter sp. (strain X514) GN=trpB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.986e-37 Identity = 80/152 (52.63%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G+FGRFGG++VPET++ L LE EF QD F EE LR+Y GR TPLY+AE LT +K G +IYLKREDLNH GAHKINN +GQ ++AKRM +K ++A TGAGQHGV +FMG D+++QS V MKLL Sbjct: 3 GRFGRFGGQYVPETVMNALIELEREFEKAKQDKDFMEEYRYYLREYSGRPTPLYYAENLT-----KKLGGAKIYLKREDLNHTGAHKINNVLGQILLAKRMNKKRVIAETGAGQHGVATATAAAMFGMECEIFMGEEDIKRQSLNVFRMKLL 149
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_LISMO (Tryptophan synthase beta chain OS=Listeria monocytogenes GN=trpB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.986e-37 Identity = 78/152 (51.32%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G+FGG+FVPETL+ + L+ + D FQ+EL+ L++YVGRETPLYFAE+LT H G +IYLKREDLNH GAHKINN IGQA++A++MG++ +VA TGAGQHGV +FMG D+++QS V M+LL Sbjct: 10 GFYGKFGGRFVPETLMKAVKELDEAYQASKTDPAFQKELNYYLKEYVGRETPLYFAEQLTAH-----AGGAKIYLKREDLNHTGAHKINNTIGQALLARQMGKQKVVAETGAGQHGVATATVAALFNMKCTIFMGEEDVKRQSLNVFRMELL 156 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |