CX043277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACC3 (Tryptophan synthase beta chain OS=Bacillus cereus (strain 03BB102) GN=trpB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35 Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG++VPETL+ + LE + ++D FQ+EL+ L YVGRETPLYFAE +T++ G +IYLKREDLNH GAHKINN IGQA++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 10 GHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLNTYVGRETPLYFAENMTEYCG-----GAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACAH (Tryptophan synthase beta chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35 Identity = 76/152 (50.00%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG++VPETL+ + LE + ++D FQ+EL+ L YVGRETPLYFAE +T++ G +IYLKREDLNH GAHKINN IGQA++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 10 GHYGIYGGRYVPETLMQSVLELEEAYKEAMEDEAFQKELNHYLNTYVGRETPLYFAENMTEYCG-----GAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_AZOVD (Tryptophan synthase beta chain OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35 Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FGRFGG++V ETL+ + L E+ D F EEL+ RDYVGR +PLYFAERLT+H G +IYLKRE+LNH GAHKINN IGQ ++A+RMG++ I+A TGAG HGV ++MGT D+++Q + V MKLL Sbjct: 14 GLFGRFGGQYVAETLMPLILDLAEEYERAKVDPAFLEELAYFQRDYVGRPSPLYFAERLTEHCG-----GAKIYLKREELNHTGAHKINNCIGQILLARRMGKQRIIAETGAGMHGVATATVAARFGLQCVIYMGTTDIDRQQANVFRMKLL 160
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB2_WOLSU (Tryptophan synthase beta chain 2 OS=Wolinella succinogenes GN=trpB2 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35 Identity = 77/152 (50.66%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG+FGG+FVPETL+ L LE+ +N + D +F E+ L++YVGR +PLY+AERL+D G +IYLKREDLNH GAHKINN + Q ++AKR+G+K I+A TGAGQHGV VFMG+ D +Q V MKLL Sbjct: 17 GHFGKFGGRFVPETLMPALLELESAYNELRFDREFWSEVDYYLKEYVGRPSPLYYAERLSDEL------GAKIYLKREDLNHTGAHKINNTVIQGLLAKRLGKKKIIAETGAGQHGVATATIAALLGLECEVFMGSKDTARQELNVFRMKLL 162
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_OLICO (Tryptophan synthase beta chain OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=trpB PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35 Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG+FV ETL+ + LE + D FQ+E++ L+DYVGR +PLYFAERLT+H G +IYLKRE+LNH G+HK+NN +GQ M+A+RMG+K I+A TGAGQHGV V+MG D+ +Q V+ M++L Sbjct: 17 GHFGTFGGRFVAETLMPLILDLEKAYAAAKADPSFQKEMNGYLKDYVGRPSPLYFAERLTEHLG-----GAKIYLKREELNHTGSHKVNNVLGQIMVARRMGKKRIIAETGAGQHGVATATLCARFGLECIVYMGAVDVARQEPNVIRMEML 163
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACCR (Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=trpB PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.573e-35 Identity = 75/152 (49.34%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G +GG++VPETL+ + LE + +QD FQ+EL+ L+ Y+GRETPLY+AE +T + G +IYLKREDLNH GAHKINN IGQA++A RMG+K +VA TGAGQHGV +FMG D+ +Q V M+LL Sbjct: 10 GHYGIYGGRYVPETLMQSVLELEEAYKEAMQDEAFQKELNHYLKTYIGRETPLYYAENMTKYCG-----GAKIYLKREDLNHTGAHKINNTIGQALLAVRMGKKKVVAETGAGQHGVATATVCALLGLECVIFMGEEDVRRQKLNVFRMELL 156
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_PHEZH (Tryptophan synthase beta chain OS=Phenylobacterium zucineum (strain HLK1) GN=trpB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.667e-35 Identity = 79/167 (47.31%), Postives = 102/167 (61.08%), Query Frame = 1 Query: 295 PKTDHDHREYWKLNPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 P +D+ Y L G+FG +GG++VPETL+ + L A + D FQ EL+ L YVGR +PLYFAERLT HY G +IYLKRE+LNH G+HKINN +GQ ++A+RMG+ I+A TGAGQHGV V+MG D+E+Q V M LL Sbjct: 4 PSRPNDYAAYPDLK-GRFGDYGGQYVPETLMPLVHELTAAYEAAKADPAFQAELAGYLTHYVGRPSPLYFAERLTRHYG-----GAKIYLKREELNHTGSHKINNCMGQILLAQRMGKTRIIAETGAGQHGVATATVCARFGLPCVVYMGAVDVERQKPNVFRMNLL 164
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_ACIBL (Tryptophan synthase beta chain OS=Acidobacteria bacterium (strain Ellin345) GN=trpB PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.667e-35 Identity = 76/152 (50.00%), Postives = 98/152 (64.47%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG +GG+FVPETL+ L LEA + +D KF+EE+ + LR+Y GR TPL+ A+ LT +K G +IYLKREDL H GAHKINN IGQ ++A+RMG+ I+A TGAGQHGV V+MG+ D+ +Q V MKLL Sbjct: 22 GYFGSYGGRFVPETLMAALQELEAAYEAAKRDKKFKEEIESLLREYAGRPTPLFLAKNLT-----QKLGGAKIYLKREDLLHTGAHKINNCIGQGLLARRMGKHRIIAETGAGQHGVASATVAALFGMECVVYMGSEDVRRQELNVFRMKLL 168
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BRAJA (Tryptophan synthase beta chain OS=Bradyrhizobium japonicum GN=trpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.095e-35 Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G FG FGG+FV ETL+ + LE + D FQ E++ L++YVGR +PLYFAERLT+H G +IYLKRE+LNH G+HK+NN +GQ M+A+RMG+K I+A TGAGQHGV V+MG D+E+Q V+ M++L Sbjct: 17 GHFGIFGGRFVAETLMPLILDLEKAYTAAKADPAFQAEMNGYLKNYVGRPSPLYFAERLTEHLG-----GAKIYLKREELNHTGSHKVNNVLGQIMLARRMGKKRIIAETGAGQHGVATATLCARFGLECVVYMGAVDVERQQPNVIRMEML 163
BLAST of CX043277 vs. ExPASy Swiss-Prot
Match: TRPB_BACV8 (Tryptophan synthase beta chain OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=trpB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.095e-35 Identity = 76/152 (50.00%), Postives = 97/152 (63.82%), Query Frame = 1 Query: 340 GKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAERLTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIGQAMIAKRMGRKSIVAATGAGQHGVXXXXXXXXXXXXXXVFMGTADMEKQSSKVLLMKLL 795 G +G FGG ++PE L C+ L+ ++ VL+ F++E LRDYVGR +PLY A RL+ Y G +IYLKREDLNH GAHKINNAIGQ ++AKRMG+K I+A TGAGQHGV V+MG D+E+Q V MK+L Sbjct: 10 GYYGEFGGAYIPEILHRCVEELQNAYSKVLESEGFKQEFHQLLRDYVGRPSPLYLANRLSKKY------GCKIYLKREDLNHTGAHKINNAIGQVLLAKRMGKKRIIAETGAGQHGVATATVCALMNMQCIVYMGKTDVERQHINVEKMKML 155 The following BLAST results are available for this feature:
BLAST of CX043277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 425
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043277 ID=CX043277; Name=CX043277; organism=Citrus sinensis; type=EST; length=796bpback to top |