EY665447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 137
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.357e-13 Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 265 PNRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPS--WYTAG 504 P+R ++ P S PE+L+G + GD+G+DP GLG PE E++H RWAMLGAAG IPE L K G P W+ G Sbjct: 65 PDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTG 151
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 220 TAGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAGEQ 510 T R +V AA + P+R + F + PE+L G PGD+G+D GL +DP+T + E++H RWA+LGA GI PELL++ G+ P W+ AG Q Sbjct: 18 TRQQRMATVPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQ 122
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.255e-12 Identity = 39/98 (39.80%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 220 TAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 TA T+ V D + L P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ G Q Sbjct: 38 TAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQ 135
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 P +L G PGD+G+D GL +DP T N + E++HCRW MLGA G PEL + G+ W+ AG Q Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQ 137
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 295 TPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ 510 +PP +L G PGD+G+D GL +DPET N + E++HCRWA+ G PELL + G+ W+ AG Q Sbjct: 63 SPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQ 135
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTK-LGI-LNTPSWYTAGEQ 510 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K +G+ P W+ AG Q Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQ 138
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 1 Query: 217 ATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELL 459 A T +++ A R LWFP PP +L G GD GFDP GL +DP T +E+ HCR +ML G +PELL Sbjct: 353 ANITTNLAMFASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433 HSP 2 Score: 70.0922 bits (170), Expect = 1.812e-11 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 268 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGE 507 + PLWFP + P WL+G GD GFDP GL +DP+T +E+ H R AML G +P+ L K GI WY A + Sbjct: 1 SHPLWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK-GI-----WYEAAQ 74
BLAST of EY665447 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 301 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILN--TPSWYTAGEQ 510 P +L+G PGD+G+D GL +DPE N E++H RWAMLGA G PE+L K ++ P W+ AG Q Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQ 135 The following BLAST results are available for this feature:
BLAST of EY665447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665447 ID=EY665447; Name=EY665447; organism=Citrus sinensis; type=EST; length=857bpback to top |